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float64
1
96
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float64
0
1.07k
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stringclasses
3 values
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stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
stringlengths
1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
gene_mention
stringlengths
2
69
originalSource
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1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
null
null
Negative
MESH:D010003
null
null
OA
60628
null
SDF-1 receptor
null
28,131,784
The OA rats received continuous infusion of AMD3100 (SDF-1 receptor blocker) in osmotic mini-pump implanted subcutaneously for 6 weeks.
null
null
null
6
0
Biomarker
C0017665
Membranous glomerulonephritis
disease
membranous nephropathy
213
ALB
serum albumin
CTD_human
15,385,633
Mouse model of membranous nephropathy induced by cationic bovine serum albumin: antigen dose-response relations and strain differences.
0.201648
Mouse model of <span class="disease" id="15385633-0-15-37">membranous nephropathy</span> induced by cationic bovine <span class="gene" id="15385633-0-65-78">serum albumin</span>: antigen dose-response relations and strain differences.
CTD_human
null
null
Negative
MESH:D052256
null
null
tendinopathy
4312;4314
null
MMP-1 and -3
null
28,091,588
HMW-HA attenuated tendinopathy by downregulating MMP-1 and -3 expression.
null
null
null
64
0
Biomarker
C0002871
Anemia
disease
anemia
2056
EPO
Erythropoietin
CTD_human
15,160,343
Erythropoietin is effective in improving the anemia induced by imatinib mesylate therapy in patients with chronic myeloid leukemia in chronic phase.
0.24092
<span class="gene" id="15160343-0-0-14">Erythropoietin</span> is effective in improving the <span class="disease" id="15160343-0-45-51">anemia</span> induced by imatinib mesylate therapy in patients with chronic myeloid leukemia in chronic phase.
CTD_human
null
null
Negative
OMIM:135300
null
null
HGF
6401
null
E-Selectin
null
28,023,369
Plasma CAF analyses from phase II and III studies previously identified candidates (HGF, IL-6, IL-8, TIMP-1, VEGF, E-Selectin and OPN) that significantly correlated with PFS for patients receiving pazopanib (ASCO 2010, #4522).
null
null
null
3
3
Biomarker
C0033860
Psoriasis
disease
psoriasis
10758
TRAF3IP2
TRAF3IP2
CTD_human
20,953,186
Common variants at TRAF3IP2 are associated with susceptibility to psoriatic arthritis and psoriasis.
0.207561
Common variants at <span class="gene" id="20953186-0-19-27">TRAF3IP2</span> are associated with susceptibility to psoriatic arthritis and <span class="disease" id="20953186-0-90-99">psoriasis</span>.
CTD_human
13
0
Biomarker
C0028754
Obesity
disease
Obese
3952
LEP
leptin
CTD_human
23,839,791
Obese leptin deficient (ob/ob) mice are a model of adiposity that displays increased levels of fat, glucose, and liver lipids.
0.72
<span class="disease" id="23839791-1-0-5">Obese</span> <span class="gene" id="23839791-1-6-12">leptin</span> deficient (ob/ob) mice are a model of adiposity that displays increased levels of fat, glucose, and liver lipids.
CTD_human;HPO
35
277
Biomarker
C0035372
Rett Syndrome
disease
Rett syndrome
4204
MECP2
MeCP2
CTD_human
22,532,851
Alterations of gene expression and glutamate clearance in astrocytes derived from an MeCP2-null mouse model of Rett syndrome.
0.92
Alterations of gene expression and glutamate clearance in astrocytes derived from an <span class="gene" id="22532851-0-85-90">MeCP2</span>-null mouse model of <span class="disease" id="22532851-0-111-124">Rett syndrome</span>.
CTD_human;ORPHANET;UNIPROT
40
0
Biomarker
C1458155
Mammary Neoplasms
group
breast tumors
2064
ERBB2
ERBB2
CTD_human
19,075,277
mRNA levels of 10 BCAR genes (AKT1, AKT2, BCAR1, BCAR3, EGFR, ERBB2, GRB7, SRC, TLE3, and TRERF1) were measured in estrogen receptor-positive breast tumors using quantitative reverse-transcriptase polymerase chain reaction.
0.369628
mRNA levels of 10 BCAR genes (AKT1, AKT2, BCAR1, BCAR3, EGFR, <span class="gene" id="19075277-3-62-67">ERBB2</span>, GRB7, SRC, TLE3, and TRERF1) were measured in estrogen receptor-positive <span class="disease" id="19075277-3-142-155">breast tumors</span> using quantitative reverse-transcriptase polymerase chain reaction.
CTD_human
1
0
Biomarker
C0014175
Endometriosis
disease
endometriosis
231
AKR1B1
AKR1B1
CTD_human
25,446,850
These cell models characterized in this study will enable further investigations into the role of PGF2? in the pathophysiology of endometriosis and the involvement of AKR1B1 and AKR1C3.
0.200275
These cell models characterized in this study will enable further investigations into the role of PGF2&alpha; in the pathophysiology of <span class="disease" id="25446850-12-130-143">endometriosis</span> and the involvement of <span class="gene" id="25446850-12-167-173">AKR1B1</span> and AKR1C3.
CTD_human
null
null
Negative
MESH:D009362
null
null
metastasis
12505
null
CD44
null
28,098,914
miR-647 also reduced the expression levels of genes associated with proliferation and metastasis in tumors, including ANK2, FAK, MMP2, MMP12, CD44 and SNAIL1.
null
null
null
null
null
Negative
MESH:D017827
null
null
wild-type
3934
null
LCN2
null
28,070,126
At a time corresponding to peak LCN2 induction in wild-type (WT) mice injected with LPS, Lcn2-/- mice challenged with LPS had exacerbated levels of pro-inflammatory cytokines and exhibited significantly worsened behavioral phenotypes.
null
null
null
null
null
Negative
MESH:D009369
null
null
cancer
18746
null
PK subtype M2
null
28,021,856
PK subtype M2 (PKM2), which is over expressed in cancer cells, facilitates the Warburg effect by switching from a highly active tetrameric form to low activity monomeric or dimeric forms.
null
null
null
8
0
Biomarker
C0043049
Water Intoxication
disease
Water intoxication
5020
OXT
oxytocin
CTD_human
803,783
Water intoxication associated with oxytocin administration during saline-induced abortion.
0.2
<span class="disease" id="803783-0-0-18">Water intoxication</span> associated with <span class="gene" id="803783-0-35-43">oxytocin</span> administration during saline-induced abortion.
CTD_human
null
null
Negative
MESH:D030342
null
null
recessive disorder
7840
null
ALMS1
null
28,112,973
BACKGROUND: Alstr m syndrome is a multi-system recessive disorder caused by mutations in ALMS1 gene.
null
null
null
null
null
Negative
MESH:D009369
null
null
cancer
644914
null
p21
null
28,052,040
Furthermore, AICAR treatment increased RORa recruitment on the promoters of tumor suppressor genes (i.e., FBXM7, SEMA3F and p21) leading to apoptosis in human gastric cancer cells.
null
null
null
null
null
Negative
MESH:D013274
null
null
GC
11487
null
ADAM10
null
28,160,627
Among candidate proteases associated with the generation of sIL-11R, ADAM10 and the related metalloprotease ADAM17 were significantly upregulated in tumours of both gp130(F/F) mice and GC patients compared to matched non-tumour tissues.
null
null
null
null
null
Negative
MESH:D011475
null
null
OS
6863
null
neurokinin A
null
28,022,660
Demographic, serial pre- and post-Rx (1,6,12,18 mos) Karnofsky performance status (KPS), biochemical (5-HIAA, chromogranin A, pancreastatin, neurokinin A [NKA]) and radiographic response data were collected and OS, PFS and BR calculated.
null
null
null
null
null
Negative
MESH:D006453
null
null
hemoglobinopathies
53335
null
BCL11A
null
28,053,695
In this study we analyzed BCL11A, GATA-1, KLF-1 genes and y-globin promoter in 60 alleles from 30 hemoglobinopathies patients under HU treatment to assess the role of these markers in HU response.
null
null
null
null
null
Negative
MESH:D016411
null
null
peripheral T-cell lymphoma
397603
null
isocitrate dehydrogenase 2
null
28,157,189
UNASSIGNED: Recent genetic analysis has identified frequent mutations in ten-eleven translocation 2 (TET2), DNA methyltransferase 3A (DNMT3A), isocitrate dehydrogenase 2 (IDH2) and ras homolog family member A (RHOA) in nodal T-cell lymphomas, including angioimmunoblastic T-cell lymphoma and peripheral T-cell lymphoma, not otherwise specified.
null
null
null
null
null
Negative
MESH:D030342
null
null
inherited lysosomal storage disorder
3783
null
KCa3.1
null
28,197,106
Recent studies suggest modulation of KCa3.1 by omega-3 fatty acids as negative modulators and impaired KCa3.1 functions in the inherited lysosomal storage disorder (LSD), Fabry disease (FD).
null
null
null
null
null
Negative
MESH:C535607
null
null
AGS
7415
null
VCP
null
28,032,027
Knock-down of VCP by siRNA enhanced sensitivity to TRAIL in AGS cells.
null
null
null
null
null
Negative
MESH:D007787
null
null
hypolactasia
3938
null
lactase
null
28,156,353
Objectives The frequency of adult-type hypolactasia (lactase non-persistence) varies widely among different ethnic groups.
null
null
null
null
null
Negative
MESH:D003920
null
null
diabetic
22340
null
VEGF-B
null
28,091,556
However, the contribution and mechanism of VEGF-B in diabetic peripheral neuropathy remains unclear.
null
null
null
2
0
Biomarker
C0524620
Metabolic Syndrome X
disease
metabolic syndrome
79661
NEIL1
NEIL1
CTD_human
16,446,448
The metabolic syndrome resulting from a knockout of the NEIL1 DNA glycosylase.
0.200275
The <span class="disease" id="16446448-0-4-22">metabolic syndrome</span> resulting from a knockout of the <span class="gene" id="16446448-0-56-61">NEIL1</span> DNA glycosylase.
CTD_human
null
null
Negative
MESH:D014923
null
null
WAS
19241
null
thymosin beta 4, X-linked
null
28,159,933
An analysis of the underlying mechanism revealed that the simultaneous inhibition of tumor growth and metastasis mediated by miR-1 was due to the synchronous targeting of 6 miR-1 target genes encoding cyclin dependent kinase 4, twinfilin actin binding protein 1, calponin 3, coronin 1C, WAS protein family member 2 and thymosin beta 4, X-linked.
null
null
null
1
0
Biomarker
C0002395
Alzheimer's Disease
disease
AD
23621
BACE1
BACE1
CTD_human
16,407,166
Our data strongly support a major role of PPARgamma in the modulation of amyloid-beta generation by inflammation and suggest that the protective mechanism of NSAIDs in AD involves activation of PPARgamma and decreased BACE1 gene transcription.
0.364253
Our data strongly support a major role of PPARgamma in the modulation of amyloid-beta generation by inflammation and suggest that the protective mechanism of NSAIDs in <span class="disease" id="16407166-11-168-170">AD</span> involves activation of PPARgamma and decreased <span class="gene" id="16407166-11-218-223">BACE1</span> gene transcription.
CTD_human
2
0
Biomarker
C0007194
Hypertrophic Cardiomyopathy
disease
hypertrophic cardiomyopathy
5894
RAF1
RAF1
CTD_human
17,603,483
Gain-of-function RAF1 mutations cause Noonan and LEOPARD syndromes with hypertrophic cardiomyopathy.
0.405755
Gain-of-function <span class="gene" id="17603483-0-17-21">RAF1</span> mutations cause Noonan and LEOPARD syndromes with <span class="disease" id="17603483-0-72-99">hypertrophic cardiomyopathy</span>.
CTD_human;HPO
null
null
Negative
MESH:D009422
null
null
Neuropathy target esterase
50767
null
PNPLA6
null
28,206,686
Neuropathy target esterase (NTE) or patatin-like phospholipase domain containing 6 (PNPLA6) was first linked with a neuropathy occurring after organophosphate poisoning and was later also found to cause complex syndromes when mutated, which can include mental retardation, spastic paraplegia, ataxia, and blindness.
null
null
null
null
null
Negative
MESH:D008380
null
null
Marek's disease
406947
null
miR-155
null
28,113,043
We also showed that v-rel could rescue the suppression of miR-155 expression observed in Marek's disease virus (MDV)-transformed cell lines, where its functional viral homologue MDV-miR-M4 is overexpressed.
null
null
null
null
null
Negative
MESH:D013167
null
null
AS
4772
null
NFATc1
null
28,191,455
However, we observed low expression of CSF1R, RANK, and NFATc1 in AS OCPs.
null
null
null
null
null
Negative
MESH:C531844
null
null
glycoprotein-Ib/IX-von Willebrand factor axis
11093
null
ADAMTS13
null
28,110,841
Promising agents under evaluation include N-acetylcysteine, bortezomib, recombinant ADAMTS13 and caplacizumab, an inhibitor of the glycoprotein-Ib/IX-von Willebrand factor axis.
null
null
null
1
0
Biomarker
C2239176
Liver carcinoma
disease
hepatocellular carcinoma
8660
IRS2
insulin receptor substrate-2
CTD_human
16,127,164
Overexpression of insulin receptor substrate-2 in human and murine hepatocellular carcinoma.
0.200824
Overexpression of <span class="gene" id="16127164-0-18-46">insulin receptor substrate-2</span> in human and murine <span class="disease" id="16127164-0-67-91">hepatocellular carcinoma</span>.
CTD_human
4
1
Therapeutic
C0004153
Atherosclerosis
disease
atherosclerosis
3949
LDLR
LDLR
CTD_human
11,947,894
Male LDLR-KO mice fed a high cholesterol (HC; 1%) diet developed atherosclerosis at 8 months of age with hypercholesterolemia.
0.261876
Male <span class="gene" id="11947894-3-5-9">LDLR</span>-KO mice fed a high cholesterol (HC; 1%) diet developed <span class="disease" id="11947894-3-65-80">atherosclerosis</span> at 8 months of age with hypercholesterolemia.
CTD_human
null
null
Negative
MESH:D000592
null
null
AA
100037690
null
PCK1
null
28,179,229
In liver, AA infusion tended to increase PCK1 gluconeogenic gene and PCK1 correlated with plasma cortisol concentrations.
null
null
null
2
0
Biomarker
C0027051
Myocardial Infarction
disease
myocardial infarction
2730
GCLM
glutamate-cysteine ligase modifier subunit
CTD_human
12,081,989
Polymorphism in the 5'-flanking region of human glutamate-cysteine ligase modifier subunit gene is associated with myocardial infarction.
0.208096
Polymorphism in the 5'-flanking region of human <span class="gene" id="12081989-0-48-90">glutamate-cysteine ligase modifier subunit</span> gene is associated with <span class="disease" id="12081989-0-115-136">myocardial infarction</span>.
CTD_human
null
null
Negative
MESH:D030342
null
null
autosomal recessive disorder
2548
null
glycogen-hydrolyzing enzyme acid a-glucosidase
null
28,185,884
BACKGROUND: Pompe disease is an autosomal recessive disorder caused by deficiency of the lysosomal glycogen-hydrolyzing enzyme acid a-glucosidase (GAA).
null
null
null
25
0
Biomarker
C0004153
Atherosclerosis
disease
atherosclerosis
348
APOE
apolipoprotein E
CTD_human
21,908,651
Now, we tested the hypothesis that activation of TRPV1 channels attenuates atherosclerosis in apolipoprotein E knockout mice (ApoE(-/-)) but not ApoE(-/-)TRPV1(-/-) double knockout mice on a high-fat diet.
0.587329
Now, we tested the hypothesis that activation of TRPV1 channels attenuates <span class="disease" id="21908651-2-75-90">atherosclerosis</span> in <span class="gene" id="21908651-2-94-110">apolipoprotein E</span> knockout mice (ApoE(-/-)) but not ApoE(-/-)TRPV1(-/-) double knockout mice on a high-fat diet.
CTD_human;HPO
68
0
Biomarker
C0020538
Hypertensive disease
group
arterial hypertension
5443
POMC
ACTH
CTD_human
6,088,243
Based on the various biological effects of ACTH different explanations are proposed: oedema or deposition of glycogen in the myocardial tissue, hyperinsulinism, arterial hypertension and increased inotropic stimulus.
0.203846
Based on the various biological effects of <span class="gene" id="6088243-8-43-47">ACTH</span> different explanations are proposed: oedema or deposition of glycogen in the myocardial tissue, hyperinsulinism, <span class="disease" id="6088243-8-161-182">arterial hypertension</span> and increased inotropic stimulus.
CTD_human
null
null
Negative
MESH:D030342
null
null
several inherited disorders
5728
null
PTEN
null
28,021,411
Moreover glioblastoma can be related with several inherited disorders that also predispose towards breast cancer, including Li-Fraumeni (p53 mutation) and Cowden (PTEN mutation) syndromes.
null
null
null
1
0
Biomarker
C0004096
Asthma
disease
asthmatic
3557
IL1RN
IL-1 ra
CTD_human
9,176,529
Effect of inhaled glucocorticoids on IL-1 beta and IL-1 receptor antagonist (IL-1 ra) expression in asthmatic bronchial epithelium.
0.234914
Effect of inhaled glucocorticoids on IL-1 beta and IL-1 receptor antagonist (<span class="gene" id="9176529-0-77-84">IL-1 ra</span>) expression in <span class="disease" id="9176529-0-100-109">asthmatic</span> bronchial epithelium.
CTD_human
24
0
Biomarker
C0002736
Amyotrophic Lateral Sclerosis
disease
ALS
6647
SOD1
superoxide dismutase 1
CTD_human
23,583,883
The aim of the work was (1) investigating on gender-dependence of disease progression in the standard model for ALS - the transgenic mouse bearing superoxide dismutase 1 gene mutations - and (2) assessing if a P2X7 receptor antagonist treatment should take into account sexual dimorphism.
0.798512
The aim of the work was (1) investigating on gender-dependence of disease progression in the standard model for <span class="disease" id="23583883-6-112-115">ALS</span> - the transgenic mouse bearing <span class="gene" id="23583883-6-147-169">superoxide dismutase 1</span> gene mutations - and (2) assessing if a P2X7 receptor antagonist treatment should take into account sexual dimorphism.
CTD_human;HPO;ORPHANET
1
0
Biomarker
C0036572
Seizures
phenotype
seizure
5066
PAM
PAM
CTD_human
19,815,072
Using mice heterozygous for peptidylglycine alpha-amidating monooxygenase (PAM), a cuproenzyme essential for the synthesis of many neuropeptides, we identified alterations in anxiety-like behavior, thermoregulation and seizure sensitivity.
0.2
Using mice heterozygous for <span class="gene" id="19815072-4-28-73">peptidylglycine alpha-amidating monooxygenase</span> (<span class="gene" id="19815072-4-75-78">PAM</span>), a cuproenzyme essential for the synthesis of many neuropeptides, we identified alterations in anxiety-like behavior, thermoregulation and <span class="disease" id="19815072-4-219-226">seizure</span> sensitivity.
CTD_human
1
0
Biomarker
C0035334
Retinitis Pigmentosa
disease
retinitis pigmentosa
57096
RPGRIP1
RPGRIP1
CTD_human
16,272,259
Identification of mutations in the AIPL1, CRB1, GUCY2D, RPE65, and RPGRIP1 genes in patients with juvenile retinitis pigmentosa.
0.404931
Identification of mutations in the AIPL1, CRB1, GUCY2D, RPE65, and <span class="gene" id="16272259-0-67-74">RPGRIP1</span> genes in patients with juvenile <span class="disease" id="16272259-0-107-127">retinitis pigmentosa</span>.
CTD_human;ORPHANET
null
null
Negative
MESH:D006528
null
null
hepatocellular carcinoma
14734
null
GPC3
null
28,035,433
Recently, we reported that GPC3-targeted CAR-T cells could eradicate hepatocellular carcinoma (HCC) xenografts in mice.
null
null
null
null
null
Negative
MESH:D000013
null
null
right defects
100009224
null
ABP
null
28,095,112
In group ABP, left defects were simply implanted with autogenous bone particles; meanwhile, group ABP-Ti animals had right defects implanted with autogenous bone particle/titanium fiber composites.
null
null
null
1
0
Biomarker
C0027126
Myotonic Dystrophy
disease
myotonic muscular dystrophy
1482
NKX2-5
NKX2-5
CTD_human
18,084,293
RNA toxicity in myotonic muscular dystrophy induces NKX2-5 expression.
0.200275
RNA toxicity in <span class="disease" id="18084293-0-16-43">myotonic muscular dystrophy</span> induces <span class="gene" id="18084293-0-52-58">NKX2-5</span> expression.
CTD_human
null
null
Negative
MESH:D010146
null
null
pain
16176
null
IL-1b
null
28,054,242
We observed that SFN dose-dependently attenuated CCI-induced pain behavioral hypersensitivity, accompanied by reduction in pro-inflammatory cytokines (TNF-a, IL-1b, IL-6) and upregulation of an anti-inflammatory cytokine (IL-10).
null
null
null
null
null
Negative
MESH:D009369
null
null
tumor
24498
null
IL-6
null
28,005,706
Treatment of CKD+Ca/P/VitD rats with atrasentan reduced vascular calcification, SBP, PP and PWV, macrophage infiltration and expression of IL-1b, IL-6, tumor necrosis factor, calgranulins and osteoblastic markers.
null
null
null
null
null
Negative
MESH:D005671
null
null
double hexamer
81620
null
Cdt1
null
28,191,894
During G1 phase, two Cdt1-Mcm2-7 heptamers are loaded onto each replication origin by the origin-recognition complex (ORC) and Cdc6 to form an inactive MCM double hexamer (DH), but the detailed loading mechanism remains unclear.
null
null
null
1
0
Biomarker
C0006845
Candidiasis, Chronic Mucocutaneous
disease
chronic mucocutaneous candidiasis
6772
STAT1
STAT1
CTD_human
21,714,643
STAT1 mutations in autosomal dominant chronic mucocutaneous candidiasis.
0.40522
<span class="gene" id="21714643-0-0-5">STAT1</span> mutations in autosomal dominant <span class="disease" id="21714643-0-38-71">chronic mucocutaneous candidiasis</span>.
CTD_human;HPO
6
7
Biomarker
C0221036
Acrodermatitis enteropathica
disease
acrodermatitis enteropathica
55630
SLC39A4
SLC39A4
CTD_human
12,068,297
Identification of SLC39A4, a gene involved in acrodermatitis enteropathica.
0.684396
Identification of <span class="gene" id="12068297-0-18-25">SLC39A4</span>, a gene involved in <span class="disease" id="12068297-0-46-74">acrodermatitis enteropathica</span>.
CTD_human;ORPHANET;UNIPROT
3
0
Biomarker
C0079541
Holoprosencephaly
disease
holoprosencephaly
6469
SHH
sonic hedgehog
CTD_human
17,525,797
Gas1 is a modifier for holoprosencephaly and genetically interacts with sonic hedgehog.
0.433105
Gas1 is a modifier for <span class="disease" id="17525797-0-23-40">holoprosencephaly</span> and genetically interacts with <span class="gene" id="17525797-0-72-86">sonic hedgehog</span>.
CTD_human;HPO
null
null
Negative
MESH:D000699
null
null
analgesia
8600
null
RANKL
null
28,044,198
By inhibiting prostaglandin synthesis, meloxicam seems to downregulate hPDL-mediated inflammation, RANKL-induced osteoclastogenesis and, consequently, tooth movement velocity by about 50%, thus limiting its suitability for analgesia during orthodontic therapy.
null
null
null
null
null
Negative
MESH:D019305
null
null
Centrotemporal Spikes
100379198
null
BECTS
null
28,209,266
Children with Benign Epilepsy with Centrotemporal Spikes (BECTS), despite high likelihood for seizure remission, are reported to have subtle difficulties in language and other cognitive skills.
null
null
null
1
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
3816
KLK1
tissue kallikrein
CTD_human
14,568,997
Gene therapy with human tissue kallikrein reduces hypertension and hyperinsulinemia in fructose-induced hypertensive rats.
0.226487
Gene therapy with human <span class="gene" id="14568997-0-24-41">tissue kallikrein</span> reduces <span class="disease" id="14568997-0-50-62">hypertension</span> and hyperinsulinemia in fructose-induced hypertensive rats.
CTD_human
null
null
Negative
MESH:D017827
null
null
type
27344
null
pen
null
28,072,690
UNASSIGNED: This study is conducted to investigate efficacy of an insulin jet injector and an insulin pen in treatment of type 2 diabetic patients.
null
null
null
3
0
Biomarker
C0342731
Deficiency of mevalonate kinase
disease
HIDS
4598
MVK
MVK
CTD_human
10,369,261
Subsequent analysis of cells from four unrelated HIDS patients revealed reduced activities of mevalonate kinase (MK; encoded by the gene MVK), a key enzyme of isoprenoid biosynthesis.
0.413121
Subsequent analysis of cells from four unrelated <span class="disease" id="10369261-4-49-53">HIDS</span> patients revealed reduced activities of <span class="gene" id="10369261-4-94-111">mevalonate kinase</span> (MK; encoded by the gene <span class="gene" id="10369261-4-137-140">MVK</span>), a key enzyme of isoprenoid biosynthesis.
CTD_human;ORPHANET
2
0
Biomarker
C2239176
Liver carcinoma
disease
hepatocellular carcinoma
2305
FOXM1
FoxM1
CTD_human
17,173,139
A cell-penetrating ARF peptide inhibitor of FoxM1 in mouse hepatocellular carcinoma treatment.
0.286593
A cell-penetrating ARF peptide inhibitor of <span class="gene" id="17173139-0-44-49">FoxM1</span> in mouse <span class="disease" id="17173139-0-59-83">hepatocellular carcinoma</span> treatment.
CTD_human
2
0
Biomarker
C0019189
Hepatitis, Chronic
disease
chronic hepatitis
150684
COMMD1
COMMD1
CTD_human
22,879,914
COMMD1-deficient dogs accumulate copper in hepatocytes and provide a good model for chronic hepatitis and fibrosis.
0.200549
<span class="gene" id="22879914-0-0-6">COMMD1</span>-deficient dogs accumulate copper in hepatocytes and provide a good model for <span class="disease" id="22879914-0-84-101">chronic hepatitis</span> and fibrosis.
CTD_human
null
null
Negative
MESH:D013224
null
null
asthmatic
3662
null
IRF4
null
28,105,134
mRNA expression levels of IL-9, STAT6, and IRF4 in PBMCs from healthy controls and asthmatic patients were detected by reverse transcription-quantitative polymerase chain reaction.
null
null
null
null
null
Negative
MESH:D010282
null
null
PG
14182;14183;14184
null
Fgfr1-3
null
28,094,278
Here, we examined the effects of Fgfr1-3, aKlotho, or Fgfr1-4 ablation specifically in the PG (conditional knockout, cKO).
null
null
null
2
0
Biomarker
C0038220
Status Epilepticus
disease
status epilepticus
4803
NGF
NGF
CTD_human
8,821,376
Cellular hybridization for BDNF, trkB, and NGF mRNAs and BDNF-immunoreactivity in rat forebrain after pilocarpine-induced status epilepticus.
0.2
Cellular hybridization for BDNF, trkB, and <span class="gene" id="8821376-0-43-46">NGF</span> mRNAs and BDNF-immunoreactivity in rat forebrain after pilocarpine-induced <span class="disease" id="8821376-0-122-140">status epilepticus</span>.
CTD_human
null
null
Negative
MESH:D014842
null
null
von Willebrand
7450
null
VWF
null
28,135,035
Methods Immunohistochemistry in serial sections along the longitudinal axis of endarterectomies from patients with symptomatic carotid stenosis (n = 19) were studied using an antibody specific for free PAI-1 (I205), an antibody with high affinity for TAFI/TAFIa (CP17) and established antibodies for smooth muscle cells (a-actin), endothelial cells (von Willebrand factor [VWF]), macrophages (CD68) and platelets (CD42).
null
null
null
4
0
Biomarker
C0018801
Heart failure
disease
heart failure
7124
TNF
TNF-alpha
CTD_human
17,337,591
Tumor necrosis factor-alpha (TNF-alpha) is a proinflammatory cytokine that has been implicated in the pathogenesis of heart failure.
0.303871
<span class="gene" id="17337591-1-0-27">Tumor necrosis factor-alpha</span> (<span class="gene" id="17337591-1-29-38">TNF-alpha</span>) is a proinflammatory cytokine that has been implicated in the pathogenesis of <span class="disease" id="17337591-1-118-131">heart failure</span>.
CTD_human
1
0
Biomarker
C0031511
Pheochromocytoma
disease
PHEO
1621
DBH
dopamine ?-hydroxylase
CTD_human
22,569,243
At both the protein and mRNA levels, MAOA and COMT are detected less often in PHEO compared with adrenal medulla, conversely to tyrosine hydroxylase, L-amino acid decarboxylase, and dopamine ?-hydroxylase, much more expressed in tumor tissue.
0.200824
At both the protein and mRNA levels, MAOA and COMT are detected less often in <span class="disease" id="22569243-9-78-82">PHEO</span> compared with adrenal medulla, conversely to tyrosine hydroxylase, L-amino acid decarboxylase, and <span class="gene" id="22569243-9-182-204">dopamine &beta;-hydroxylase</span>, much more expressed in tumor tissue.
CTD_human
1
0
Biomarker
C0007131
Non-Small Cell Lung Carcinoma
disease
non-small cell lung cancer
356
FASLG
FasL
CTD_human
21,807,637
A polymorphic -844T/C in FasL promoter predicts survival and relapse in non-small cell lung cancer.
0.201099
A polymorphic -844T/C in <span class="gene" id="21807637-0-25-29">FasL</span> promoter predicts survival and relapse in <span class="disease" id="21807637-0-72-98">non-small cell lung cancer</span>.
CTD_human
2
0
Biomarker
C0020295
Hydronephrosis
disease
hydronephrosis
9536
PTGES
microsomal prostaglandin E synthase-1
CTD_human
22,430,074
Critical role of microsomal prostaglandin E synthase-1 in the hydronephrosis caused by lactational exposure to dioxin in mice.
0.2
Critical role of <span class="gene" id="22430074-0-17-54">microsomal prostaglandin E synthase-1</span> in the <span class="disease" id="22430074-0-62-76">hydronephrosis</span> caused by lactational exposure to dioxin in mice.
CTD_human
1
0
Biomarker
C1961099
Precursor T-Cell Lymphoblastic Leukemia-Lymphoma
disease
T-cell acute lymphoblastic leukemia
84295
PHF6
PHF6
CTD_human
20,228,800
PHF6 mutations in T-cell acute lymphoblastic leukemia.
0.201923
<span class="gene" id="20228800-0-0-4">PHF6</span> mutations in <span class="disease" id="20228800-0-18-53">T-cell acute lymphoblastic leukemia</span>.
CTD_human
1
0
Biomarker
C0007760
Cerebellar Diseases
group
cerebellar dysfunction
4842
NOS1
nNOS
CTD_human
25,511,929
Thus, homozygous mutation of the nNOS gene increases vulnerability to alcohol-induced cerebellar dysfunction and neuronal loss. nNOS is the first gene identified whose mutation worsens alcohol-induced cerebellar behavioral deficits.
0.2
Thus, homozygous mutation of the <span class="gene" id="25511929-13-33-37">nNOS</span> gene increases vulnerability to alcohol-induced <span class="disease" id="25511929-13-86-108">cerebellar dysfunction</span> and neuronal loss. nNOS is the first gene identified whose mutation worsens alcohol-induced cerebellar behavioral deficits.
CTD_human
null
null
Negative
MESH:D008107
null
null
liver damage
116637
null
CCl4
null
28,064,552
OBJECTIVE: The present study investigated the hepatoprotective effect and underlying mechanisms of b-aescin in CCl4-induced liver damage.
null
null
null
null
null
Negative
MESH:D000860
null
null
hypoxia
100302167
null
hsa-mir-1299
null
28,074,387
RESULTS: We found that six genes were differentially methylated in the test samples, of which four were linked to ischaemia or hypoxia (REXO1L1, TLR4, hsa-mir-1299, ANKRD2).
null
null
null
1
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
renal cell carcinoma
1381
CRABP1
Cellular retinoic acid binding protein I
CTD_human
16,254,461
Cellular retinoic acid binding protein I: expression and functional influence in renal cell carcinoma.
0.203008
<span class="gene" id="16254461-0-0-40">Cellular retinoic acid binding protein I</span>: expression and functional influence in <span class="disease" id="16254461-0-81-101">renal cell carcinoma</span>.
CTD_human
3
1
Biomarker
C0009952
Febrile Convulsions
disease
febrile seizures
6323
SCN1A
SCN1A
CTD_human
25,362,483
Recurrent mutations in three main genes (SCN1A, SCN1B and GABRG2) have been identified that cause febrile seizures with or without epilepsy.
0.436791
Recurrent mutations in three main genes (<span class="gene" id="25362483-2-41-46">SCN1A</span>, SCN1B and GABRG2) have been identified that cause <span class="disease" id="25362483-2-98-114">febrile seizures</span> with or without epilepsy.
CTD_human;HPO
2
0
Biomarker
C1956346
Coronary Artery Disease
disease
CAD
7422
VEGFA
VEGF165
CTD_human
14,668,888
Direct myocardial administration of genes encoding VEGF165 can be an effective method of treatment in patients with chronic and advanced CAD either as a supplementary treatment or as a single therapy.
0.23201
Direct myocardial administration of genes encoding <span class="gene" id="14668888-12-51-58">VEGF165</span> can be an effective method of treatment in patients with chronic and advanced <span class="disease" id="14668888-12-137-140">CAD</span> either as a supplementary treatment or as a single therapy.
CTD_human
4
8
Biomarker
C0796135
Renpenning syndrome 1
disease
Renpenning syndrome
10084
PQBP1
PQBP1
CTD_human
15,024,694
Novel truncating mutations in the polyglutamine tract binding protein 1 gene (PQBP1) cause Renpenning syndrome and X-linked mental retardation in another family with microcephaly.
0.402473
Novel truncating mutations in the <span class="gene" id="15024694-0-34-71">polyglutamine tract binding protein 1</span> gene (<span class="gene" id="15024694-0-78-83">PQBP1</span>) cause <span class="disease" id="15024694-0-91-110">Renpenning syndrome</span> and X-linked mental retardation in another family with microcephaly.
CTD_human;UNIPROT
35
84
Biomarker
C0022716
Menkes Kinky Hair Syndrome
disease
Menkes disease
538
ATP7A
ATP7A
CTD_human
17,483,305
Phenotypic diversity of Menkes disease in mottled mice is associated with defects in localisation and trafficking of the ATP7A protein.
0.727934
Phenotypic diversity of <span class="disease" id="17483305-0-24-38">Menkes disease</span> in mottled mice is associated with defects in localisation and trafficking of the <span class="gene" id="17483305-0-121-126">ATP7A</span> protein.
CTD_human;ORPHANET;UNIPROT
12
0
Biomarker
C0030567
Parkinson Disease
disease
PD
5071
PARK2
Park2
CTD_human
24,582,596
Here we have tested in vitro the effect of resveratrol treatment on primary fibroblast cultures from two patients with early-onset PD linked to different Park2 mutations.
0.413846
Here we have tested in vitro the effect of resveratrol treatment on primary fibroblast cultures from two patients with early-onset <span class="disease" id="24582596-5-131-133">PD</span> linked to different <span class="gene" id="24582596-5-154-159">Park2</span> mutations.
CTD_human
null
null
Negative
MESH:C536528
null
null
LPS
7124
null
TNF-a
null
28,138,327
We demonstrate that GM-CSF and IL-3 priming enhances TNF-a production upon subsequent LPS stimulation (short-term model of trained immunity) in a p38- and SIRT2-dependent manner without increasing TNF primary transcript levels (a more direct measure of transcription), thus supporting a posttranscriptional regulation of TNF-a in primed monocytes.
null
null
null
null
null
Negative
MESH:D009410
null
null
neuronal death
216439
null
PIKE
null
28,096,359
Hence, our findings demonstrate that a-synuclein neutralizes PIKE-L's neuroprotective actions in synucleinopathies, triggering dopaminergic neuronal death by hyperactivating AMPK.
null
null
null
2
0
Biomarker
C0022658
Kidney Diseases
group
nephropathy
142
PARP1
PARP-1
CTD_human
20,561,897
Here, we show that hPARP-1 mice exhibit impaired survival rates accompanied by reduced hair growth and premature development of several inflammation and age-associated pathologies, such as adiposity, kyphosis, nephropathy, dermatitis, pneumonitis, cardiomyopathy, hepatitis, and anemia.
0.2
Here, we show that h<span class="gene" id="20561897-6-20-26">PARP-1</span> mice exhibit impaired survival rates accompanied by reduced hair growth and premature development of several inflammation and age-associated pathologies, such as adiposity, kyphosis, <span class="disease" id="20561897-6-210-221">nephropathy</span>, dermatitis, pneumonitis, cardiomyopathy, hepatitis, and anemia.
CTD_human
1
0
Biomarker
C0037286
Skin Neoplasms
group
skin tumors
2993
GYPA
GPA
CTD_human
17,029,826
These data demonstrate that arsenic exposure is associated with mutations at the GPA locus, an effect exaggerated in patients bearing arsenic-induced skin tumors.
0.200275
These data demonstrate that arsenic exposure is associated with mutations at the <span class="gene" id="17029826-10-81-84">GPA</span> locus, an effect exaggerated in patients bearing arsenic-induced <span class="disease" id="17029826-10-150-161">skin tumors</span>.
CTD_human
1
0
Biomarker
C0027121
Myositis
disease
myositis
3557
IL1RN
IL-1RN
CTD_human
10,886,238
Because IL-1alpha and IL-1beta, and the anti-inflammatory competitive inhibitor, IL-1 receptor antagonist (IL-1Ra), have been implicated in the pathogenesis of myositis, we assessed the role of variable number tandem repeat (VNTR) polymorphisms of the IL-1Ra gene (IL-1RN) in the aetiology of JIIM: IL-1RN VNTR polymorphisms were performed on 250 JIIM patients and 471 race-matched controls and were correlated with clinical characteristics.
0.200549
Because IL-1alpha and IL-1beta, and the anti-inflammatory competitive inhibitor, IL-1 receptor antagonist (<span class="gene" id="10886238-2-107-113">IL-1Ra</span>), have been implicated in the pathogenesis of <span class="disease" id="10886238-2-160-168">myositis</span>, we assessed the role of variable number tandem repeat (VNTR) polymorphisms of the <span class="gene" id="10886238-2-252-258">IL-1Ra</span> gene (<span class="gene" id="10886238-2-265-271">IL-1RN</span>) in the aetiology of JIIM: <span class="gene" id="10886238-2-299-305">IL-1RN</span> VNTR polymorphisms were performed on 250 JIIM patients and 471 race-matched controls and were correlated with clinical characteristics.
CTD_human
null
null
Negative
MESH:D006623
null
null
VHL
5159
null
PDGFRb
null
28,143,107
The gene probes chosen for this analysis were; VHL, FHIT, FGFR1/3, PDGFb, PDGFRb, EGFR, MYC and IGH@.
null
null
null
null
null
Negative
MESH:D019694
null
null
chronic hepatitis B
3805
null
KIR
null
28,211,154
Fifty-seven subjects with chronic hepatitis B (CHB), 44 subjects with resolved HBV infection and 60 healthy uninfected controls (HC) were genotyped for KIR and their HLA ligands.
null
null
null
null
null
Negative
MESH:D007174
null
null
randomized controlled trials
64805
null
P2Y12
null
28,089,137
METHODS: MEDLINE/PubMed and ClinicalTrials.gov were searched for randomized controlled trials (RCTs) that compared at least two P2Y12 inhibitors including cangrelor, clopidogrel, prasugrel, and ticagrelor.
null
null
null
64
0
Therapeutic
C0002871
Anemia
disease
anemia
2056
EPO
Epo
CTD_human
8,260,696
Administration of a lower Epo dose (1 U Epo) resulted in only a modest retardation of AZT-induced anemia, although, when combined with heme, there was a great improvement in recovery of erythropoiesis.
0.24092
Administration of a lower <span class="gene" id="8260696-4-26-29">Epo</span> dose (1 U <span class="gene" id="8260696-4-40-43">Epo</span>) resulted in only a modest retardation of AZT-induced <span class="disease" id="8260696-4-98-104">anemia</span>, although, when combined with heme, there was a great improvement in recovery of erythropoiesis.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumor
15978
null
IFN-gamma
null
28,136,733
UNASSIGNED: 271 Background: ALT-801, a T-cell receptor/IL-2 fusion protein, activates NK and CD4(+) lymphocytes to secrete IFN-gamma which re-polarizes tumor associated macrophages from M1 to M2 in various murine tumor models.
null
null
null
null
null
Negative
MESH:D013132
null
null
inherited ataxia
110616
null
ATXN3
null
28,157,529
UNASSIGNED: Machado-Joseph disease (MJD) is a dominantly inherited ataxia caused by a polyglutamine-coding expansion in the ATXN3 gene.
null
null
null
null
null
Negative
MESH:D010146
null
null
pain
29650
null
ADAM10
null
28,169,407
Methods: Using the spinal nerve ligation model, we investigated whether ADAM10 proteins participate in pain regulation.
null
null
null
null
null
Negative
MESH:D006509
null
null
Hepatitis B
944566
null
HBx
null
28,212,627
BACKGROUND: The Hepatitis B Virus (HBV) HBx regulatory protein is required for HBV replication and involved in HBV-related carcinogenesis.
null
null
null
null
null
Negative
MESH:D056587
null
null
Cryopyrin-Associated Periodic Syndromes
16176
null
IL-1b
null
28,148,962
Additionally, QUC inhibited IL-1b in Cryopyrin-Associated Periodic Syndromes (CAPS) macrophages, where NLRP3 inflammasome is constitutively activated.
null
null
null
2
0
Biomarker
C0033578
Prostatic Neoplasms
group
prostate tumor
3169
FOXA1
FOXA1
CTD_human
26,457,646
Introduction of FOXA1 and HOXB13 into an immortalized prostate cell line reprogrammed the AR cistrome to resemble that of a prostate tumor, functionally linking these specific factors to AR cistrome reprogramming.
0.203008
Introduction of <span class="gene" id="26457646-6-16-21">FOXA1</span> and HOXB13 into an immortalized prostate cell line reprogrammed the AR cistrome to resemble that of a <span class="disease" id="26457646-6-124-138">prostate tumor</span>, functionally linking these specific factors to AR cistrome reprogramming.
CTD_human
null
null
Negative
MESH:D006332
null
null
obesity-related cardiac hypertrophy
26416
null
p38 MAPK
null
28,158,919
Obesity often leads to obesity-related cardiac hypertrophy (ORCH), which is suppressed by zinc-induced inactivation of p38 mitogen-activated protein kinase (p38 MAPK).
null
null
null
null
null
Negative
MESH:D049914
null
null
deficient homologous repair
472;672;675
null
BRCA1/2 and ATM
null
28,022,799
PARP inhibition enhances chemotherapy and induces cell death by synthetic lethality in patients with deficient homologous repair (BRCA1/2 and ATM).
null
null
null
69
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensin II
CTD_human
26,564,064
Role of the Na+/H+ exchanger 3 in angiotensin II-induced hypertension in NHE3-deficient mice with transgenic rescue of NHE3 in small intestines.
0.52
Role of the Na+/H+ exchanger 3 in <span class="gene" id="26564064-0-34-48">angiotensin II</span>-induced <span class="disease" id="26564064-0-57-69">hypertension</span> in NHE3-deficient mice with transgenic rescue of NHE3 in small intestines.
CTD_human
3
21
Biomarker
C0268263
Multiple Sulfatase Deficiency Disease
disease
Multiple sulfatase deficiency
285362
SUMF1
SUMF1
CTD_human
17,657,823
Multiple sulfatase deficiency is due to hypomorphic mutations of the SUMF1 gene.
0.683571
<span class="disease" id="17657823-0-0-29">Multiple sulfatase deficiency</span> is due to hypomorphic mutations of the <span class="gene" id="17657823-0-69-74">SUMF1</span> gene.
CTD_human;ORPHANET;UNIPROT
2
1
Biomarker
C0238358
Hypokalemic periodic paralysis
disease
hypokalemic periodic paralysis
779
CACNA1S
CACNA1S
CTD_human
19,822,448
Severe respiratory phenotype caused by a de novo Arg528Gly mutation in the CACNA1S gene in a patient with hypokalemic periodic paralysis.
0.417265
Severe respiratory phenotype caused by a de novo Arg528Gly mutation in the <span class="gene" id="19822448-0-75-82">CACNA1S</span> gene in a patient with <span class="disease" id="19822448-0-106-136">hypokalemic periodic paralysis</span>.
CTD_human;ORPHANET
2
0
Biomarker
C0028754
Obesity
disease
obesity
3358
HTR2C
HTR2C
CTD_human
17,702,092
Evidence was based on the observation that knock-out mice for the HTR2C receptor gene develop obesity and that many antipsychotics (AP) with potent HTR2C antagonism may induce weight gain in susceptible individuals.
0.226334
Evidence was based on the observation that knock-out mice for the <span class="gene" id="17702092-2-66-71">HTR2C</span> receptor gene develop <span class="disease" id="17702092-2-94-101">obesity</span> and that many antipsychotics (AP) with potent <span class="gene" id="17702092-2-148-153">HTR2C</span> antagonism may induce weight gain in susceptible individuals.
CTD_human
null
null
Negative
MESH:D056486
null
null
hepatic toxicity
116637
null
CCl4
null
28,084,470
At equivalent doses, NCX 6560 eliminated hepatic toxicity and reduced muscular toxicity (60-74%) caused by atorvastatin in the more advanced BDL model; toxicity was minimal in the CCl4 model.
null
null
null