NofPmids
float64
1
96
NofSnps
float64
0
1.07k
associationType
stringclasses
3 values
diseaseId
stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
stringlengths
1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
gene_mention
stringlengths
2
69
originalSource
stringclasses
1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
null
null
Negative
MESH:D030342
null
null
genetic defects
2767
null
GNA11
null
28,012,237
Other pigmented neoplasms, such as uveal melanomas and melanocytomas (MCs), are associated with genetic defects in other genes including GNA11.
null
null
null
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
3927
LASP1
LASP1
CTD_human
17,376,794
Nominally significant single SNP and/or haplotype-based association results were detected in 15 genes, of which, MYO1D, ACCN1 and LASP1 stand out as genes with autism risk alleles requiring further study, with potential GRRs in the range of 1.34-2.29.
0.202682
Nominally significant single SNP and/or haplotype-based association results were detected in 15 genes, of which, MYO1D, ACCN1 and <span class="gene" id="17376794-9-130-135">LASP1</span> stand out as genes with <span class="disease" id="17376794-9-160-166">autism</span> risk alleles requiring further study, with potential GRRs in the range of 1.34-2.29.
CTD_human
1
0
Biomarker
C0948089
Acute Coronary Syndrome
disease
ACS
2597
GAPDH
glyceraldehyde-3-phosphate dehydrogenase
CTD_human
21,751,358
The expression levels of proteins involved in cellular cytoskeleton (F-actin capping, ?-tubulin, ?-tubulin isotypes 1 and 2, vinculin, vimentin and two Ras-related protein Rab-7b isotypes), glycolysis pathway (glyceraldehyde-3-phosphate dehydrogenase, lactate dehydrogenase and two pyruvate kinase isotypes) and cellular-related antioxidant system (manganese superoxide dismutase) and even the expression and activity of glutathione-S-transferase were significantly reduced in platelets from ACS patients compared to CAD patients.
0.2
The expression levels of proteins involved in cellular cytoskeleton (F-actin capping, &beta;-tubulin, &alpha;-tubulin isotypes 1 and 2, vinculin, vimentin and two Ras-related protein Rab-7b isotypes), glycolysis pathway (<span class="gene" id="21751358-4-210-250">glyceraldehyde-3-phosphate dehydrogenase</span>, lactate dehydrogenase and two pyruvate kinase isotypes) and cellular-related antioxidant system (manganese superoxide dismutase) and even the expression and activity of glutathione-S-transferase were significantly reduced in platelets from <span class="disease" id="21751358-4-492-495">ACS</span> patients compared to CAD patients.
CTD_human
null
null
Negative
MESH:D014390
null
null
TB
3558
null
IL-2
null
28,033,330
The concentration of IFN-y, IP-10, and IL-2 was determined in peripheral blood mononuclear cells (PBMCs) after short-term (24h) or long-term (72h) stimulation with TB antigens including ESAT-6/CFP-10 (EC) and purified protein derivative (PPD).EC-stimulated IL-2 and gamma interferon-inducible protein 10 (IP-10) release (24h and 72h) showed a good diagnostic performance in distinguishing between TB-infected and TB-uninfected individuals, but failed to discriminate between ATB and LTBI.
null
null
null
null
null
Negative
MESH:D020426
null
null
hyperglycemic SCs and sciatic nerve
3630
null
insulin
null
28,065,675
We also studied the ability of insulin to regulate the expression of different receptor substrates like insulin receptor substrate-1 (IRS1), insulin receptor substrate-2 (IRS2) and growth factor receptor-bound protein-2 (GRB2) that propagate the insulin signaling and also their variation in hyperglycemic SCs and sciatic nerve of the diabetic rats.
null
null
null
null
null
Negative
MESH:C564650
null
null
GIST
947
null
CD34
null
28,020,907
GIST expressing CD34 have a better PFS.
null
null
null
1
0
Therapeutic
C0009375
Colonic Neoplasms
group
colon tumors
11156
PTP4A3
Ptp4a3
CTD_human
23,555,575
Ptp4a3-null mice developed 50% fewer colon tumors than wildtype mice after exposure to azoxymethane and dextran sodium sulfate.
0.200549
<span class="gene" id="23555575-10-0-6">Ptp4a3</span>-null mice developed 50% fewer <span class="disease" id="23555575-10-37-49">colon tumors</span> than wildtype mice after exposure to azoxymethane and dextran sodium sulfate.
CTD_human
null
null
Negative
MESH:D015419
null
null
hereditary spastic paraplegia
85465
null
ethanolaminephosphotransferase 1
null
28,052,917
Here, we report an unusual autosomal recessive neurodegenerative condition, best classified as a complicated form of hereditary spastic paraplegia, associated with mutation in the ethanolaminephosphotransferase 1 (EPT1) gene (now known as SELENOI), responsible for the final step in Kennedy pathway forming phosphatidylethanolamine from CDP-ethanolamine.
null
null
null
null
null
Negative
MESH:D058729
null
null
PAD
17196
null
mBP
null
28,197,286
RESULTS: SBP, mBP, PP, UT, and %MAP in the PAD group were significantly higher.
null
null
null
1
0
Biomarker
C0036341
Schizophrenia
disease
SZ
220988
HNRNPA3
HNRPA3
CTD_human
16,223,876
Implementing this systematic approach, we: (i) discovered 177 putative SZ risk genes in brain, 28 of which map to linked chromosomal loci; (ii) delineated six biological processes and 12 molecular functions that may be particularly disrupted in the illness; (iii) identified 123 putative SZ biomarkers in blood, 6 of which (BTG1, GSK3A, HLA-DRB1, HNRPA3, SELENBP1, and SFRS1) had corresponding differential expression in brain; (iv) verified the differential expression of the strongest candidate SZ biomarker (SELENBP1) in blood; and (v) demonstrated neuronal and glial expression of SELENBP1 protein in brain.
0.200275
Implementing this systematic approach, we: (i) discovered 177 putative <span class="disease" id="16223876-4-71-73">SZ</span> risk genes in brain, 28 of which map to linked chromosomal loci; (ii) delineated six biological processes and 12 molecular functions that may be particularly disrupted in the illness; (iii) identified 123 putative SZ biomarkers in blood, 6 of which (BTG1, GSK3A, HLA-DRB1, <span class="gene" id="16223876-4-347-353">HNRPA3</span>, SELENBP1, and SFRS1) had corresponding differential expression in brain; (iv) verified the differential expression of the strongest candidate SZ biomarker (SELENBP1) in blood; and (v) demonstrated neuronal and glial expression of SELENBP1 protein in brain.
CTD_human
1
0
Biomarker
C0014556
Epilepsy, Temporal Lobe
disease
temporal lobe epilepsy
2912
GRM2
mGlu2
CTD_human
18,804,094
These data indicate a long-lasting impairment of mGlu2/3 expression that may contribute to abnormal presynaptic plasticity, exaggerate glutamate release and hyperexcitability in temporal lobe epilepsy.
0.200275
These data indicate a long-lasting impairment of <span class="gene" id="18804094-8-49-54">mGlu2</span>/3 expression that may contribute to abnormal presynaptic plasticity, exaggerate glutamate release and hyperexcitability in <span class="disease" id="18804094-8-178-200">temporal lobe epilepsy</span>.
CTD_human
null
null
Negative
MESH:D014947
null
null
burn injury
16658
null
MafB
null
28,031,160
Overall, results demonstrate that b-adrenergic blockers following burn injury can redirect the hematopoietic commitment toward erythroid lineage by lowering MafB expression in multipotent progenitors and be of potential therapeutic value to increase erythropoietin responsiveness in burn patients.
null
null
null
null
null
Negative
MESH:D011475
null
null
OS
4524
null
MTHFR
null
28,021,222
In addition, there was a statistically significant association been MTHFR A1298C rs1801131 and OS (p=0.044).
null
null
null
null
null
Negative
MESH:D019294
null
null
CTX
25295
null
osteocalcin
null
28,015,551
Serum bone biomarkers osteocalcin (OC) and C-terminal telopeptides (CTX) were measured at 0, 1.5, 4 and 6 wks by ELISA.
null
null
null
2
0
Biomarker
C0020429
Hyperalgesia
phenotype
hyperalgesia
5594
MAPK1
ERK
CTD_human
12,941,468
The upstream inhibitor of ERK phosphorylation, U0126 (100-400 microg/kg, i.v., 10 min pre-capsaicin), dose-dependently inhibited referred hyperalgesia 3-6 h after capsaicin.
0.2
The upstream inhibitor of <span class="gene" id="12941468-7-26-29">ERK</span> phosphorylation, U0126 (100-400 microg/kg, i.v., 10 min pre-capsaicin), dose-dependently inhibited referred <span class="disease" id="12941468-7-138-150">hyperalgesia</span> 3-6 h after capsaicin.
CTD_human
null
null
Negative
OMIM:612348
null
null
mitogen-activated protein
5601
null
SAPK
null
28,087,833
We previously reported that DPAA induces cellular activation in cultured rat cerebellar astrocytes, dose-dependent promotion of cell growth (low DPAA), cell death (high DPAA), and increased phosphorylation of mitogen-activated protein (MAP) kinases (p38MAPK, SAPK/JNK, and ERK1/2).
null
null
null
2
0
Biomarker
C0036572
Seizures
phenotype
seizure
2572
GAD2
GAD65
CTD_human
8,985,701
Labeling for GAD65 mRNA and associated protein is substantially increased in the remaining GABA neurons at 2-4 months after the initial seizure episode.
0.200275
Labeling for <span class="gene" id="8985701-6-13-18">GAD65</span> mRNA and associated protein is substantially increased in the remaining GABA neurons at 2-4 months after the initial <span class="disease" id="8985701-6-136-143">seizure</span> episode.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumor
16193
null
IL-6
null
28,081,628
SC or SCH significantly inhibited the levels of IL-6, tumor necrosis factor (TNF)-[Formula: see text], and IL-1[Formula: see text] in spleen of the OVA-sensitized mice.
null
null
null
2
0
Biomarker
C0014175
Endometriosis
disease
endometriosis
6715
SRD5A1
SRD5A1
CTD_human
23,183,084
Altogether, our data in this Z-12 cell model suggest that the beneficial effects of treatment with progestin observed in endometriosis patients might arise from decreased pre-receptor metabolism of the protective progesterone by the SRD5A1 and AKR1C enzymes.
0.2
Altogether, our data in this Z-12 cell model suggest that the beneficial effects of treatment with progestin observed in <span class="disease" id="23183084-11-121-134">endometriosis</span> patients might arise from decreased pre-receptor metabolism of the protective progesterone by the <span class="gene" id="23183084-11-233-239">SRD5A1</span> and AKR1C enzymes.
CTD_human
2
0
Biomarker
C0424295
Hyperactive behavior
phenotype
hyperactivity
2890
GRIA1
GluR1
CTD_human
18,171,924
Intrahippocampal infusion studies with the AMPA-specific inhibitor GYKI 52466 [4-(8-methyl-9H-1,3-dioxolo[4,5-h][2,3]benzodiazepin-5-yl)-benzenamine hydrochloride], a GluR1-specific TAT-S845 peptide, showed that GluR1/2 was essential for the development of manic/hedonic-like behaviors such as amphetamine-induced hyperactivity.
0.2
Intrahippocampal infusion studies with the AMPA-specific inhibitor GYKI 52466 [4-(8-methyl-9H-1,3-dioxolo[4,5-h][2,3]benzodiazepin-5-yl)-benzenamine hydrochloride], a <span class="gene" id="18171924-6-167-172">GluR1</span>-specific TAT-S845 peptide, showed that <span class="gene" id="18171924-6-212-217">GluR1</span>/2 was essential for the development of manic/hedonic-like behaviors such as amphetamine-induced <span class="disease" id="18171924-6-314-327">hyperactivity</span>.
CTD_human
null
null
Negative
MESH:D058225
null
null
amyloid deposits
3375
null
hIAPP
null
28,198,575
Human islet amyloid polypeptide (hIAPP), a major constituent of islet amyloid deposits, induces pancreatic b-cell apoptosis and eventually contributes to b-cell deficit in patients with type 2 diabetes mellitus (T2DM).
null
null
null
1
0
Therapeutic
C0030567
Parkinson Disease
disease
PD
3303
HSPA1A
HSPA1A
CTD_human
15,585,408
Here we tested the potential of Hsp70 (approved gene symbol HSPA1A) for gene therapy in the 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) mouse model of idiopathic PD.
0.202682
Here we tested the potential of Hsp70 (approved gene symbol <span class="gene" id="15585408-6-60-66">HSPA1A</span>) for gene therapy in the 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP) mouse model of idiopathic <span class="disease" id="15585408-6-170-172">PD</span>.
CTD_human
null
null
Negative
MESH:D064420
null
null
cytotoxicity
16642
null
NKG2C
null
28,031,335
These data suggest ThCTL are marked by the expression of NKG2C/E and represent a unique CD4 effector population specialized for cytotoxicity.
null
null
null
1
0
Biomarker
C0001430
Adenoma
group
adenomas
2705
GJB1
Cx32
CTD_human
16,926,031
Surprisingly, in lung adenomas Cx32 and Cx43 expressions were not detected, although the expression of connexins 26 and 46 was present.
0.2
Surprisingly, in lung <span class="disease" id="16926031-11-22-30">adenomas</span> <span class="gene" id="16926031-11-31-35">Cx32</span> and Cx43 expressions were not detected, although the expression of connexins 26 and 46 was present.
CTD_human
7
1
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
3667
IRS1
IRS1
CTD_human
19,734,900
Genetic variant near IRS1 is associated with type 2 diabetes, insulin resistance and hyperinsulinemia.
0.669945
Genetic variant near <span class="gene" id="19734900-0-21-25">IRS1</span> is associated with <span class="disease" id="19734900-0-45-60">type 2 diabetes</span>, insulin resistance and hyperinsulinemia.
CTD_human;UNIPROT
null
null
Negative
MESH:D064420
null
null
toxicities
20692
null
SPARC
null
28,022,703
In this study we evaluated paclitaxel (P) and NP toxicities; SPARC's role in NP sensitivity; intraperitoneal NP effect and maximum tolerated dose (MTD) in mice with ovarian cancer.
null
null
null
1
0
Biomarker
C0030312
Pancytopenia
disease
pancytopenia
1719
DHFR
DHFR
CTD_human
21,310,276
We describe three individuals from two families with a recessive inborn error of metabolism, characterized by megaloblastic anemia and/or pancytopenia, severe cerebral folate deficiency, and cerebral tetrahydrobiopterin deficiency due to a germline missense mutation in DHFR, resulting in profound enzyme deficiency.
0.4
We describe three individuals from two families with a recessive inborn error of metabolism, characterized by megaloblastic anemia and/or <span class="disease" id="21310276-2-138-150">pancytopenia</span>, severe cerebral folate deficiency, and cerebral tetrahydrobiopterin deficiency due to a germline missense mutation in <span class="gene" id="21310276-2-270-274">DHFR</span>, resulting in profound enzyme deficiency.
CTD_human;HPO
null
null
Negative
MESH:D017695
null
null
tissue microarray
2064
null
HER2
null
28,196,634
HER2 antibodies targeting ICD (CB11) and ECD (SP3) were validated and standardized using the AQUA method of quantitative immunofluorescence (QIF) and a previously reported HER2 standardization tissue microarray (TMA).
null
null
null
11
4
Biomarker
C0023467
Leukemia, Myelocytic, Acute
disease
acute myeloid leukemia
2322
FLT3
FLT3
CTD_human
21,482,694
Potent activity of ponatinib (AP24534) in models of FLT3-driven acute myeloid leukemia and other hematologic malignancies.
0.52
Potent activity of ponatinib (AP24534) in models of <span class="gene" id="21482694-0-52-56">FLT3</span>-driven <span class="disease" id="21482694-0-64-86">acute myeloid leukemia</span> and other hematologic malignancies.
CTD_human
null
null
Negative
MESH:D008545
null
null
melanoma
353326
null
MART1
null
28,178,658
MART1, a human melanoma-specific tumor antigen, was used to induce an increased immune reaction, since a MART1-protective response is required to overcome immune tolerance to the melanoma antigen MelanA.
null
null
null
4
0
Biomarker
C0018824
Heart valve disease
group
cardiac valvulopathy
3357
HTR2B
5-HT(2B
CTD_human
11,104,741
Evidence for possible involvement of 5-HT(2B) receptors in the cardiac valvulopathy associated with fenfluramine and other serotonergic medications.
0.28
Evidence for possible involvement of <span class="gene" id="11104741-0-37-44">5-HT(2B</span>) receptors in the <span class="disease" id="11104741-0-63-83">cardiac valvulopathy</span> associated with fenfluramine and other serotonergic medications.
CTD_human
2
0
Biomarker
C0024121
Lung Neoplasms
group
lung tumor
7276
TTR
transthyretin
CTD_human
17,902,193
Notably, we demonstrate significant regulation of alpha-1-antitrypsin, alpha-2-macroglobulin, hemoglobin subunit alpha, vitamin D-binding protein, major urinary proteins, and transthyretin (up to eight-fold) in serum of lung tumor bearing mice.
0.205466
Notably, we demonstrate significant regulation of alpha-1-antitrypsin, alpha-2-macroglobulin, hemoglobin subunit alpha, vitamin D-binding protein, major urinary proteins, and <span class="gene" id="17902193-7-175-188">transthyretin</span> (up to eight-fold) in serum of <span class="disease" id="17902193-7-220-230">lung tumor</span> bearing mice.
CTD_human
null
null
Negative
MESH:D006130
null
null
transforming growth factor b
21803
null
TGFB
null
28,174,730
BACKGROUND _ AIMS: Pancreatic stellate cells (PSCs) regulate the development of chronic pancreatitis (CP) and are activated by the cytokine transforming growth factor b (TGFB).
null
null
null
null
null
Negative
MESH:D014897
null
null
SMA
302582
null
KLF8
null
28,066,139
The promoter activity of SMA, SM22a, and KLF8 was significantly elevated in the contractile phenotype of VSMCs.
null
null
null
1
0
Biomarker
C0024305
Lymphoma, Non-Hodgkin
disease
NHL
4524
MTHFR
MTHFR
CTD_human
17,488,658
Our data suggest that MTHFR gene variants play a critical role in NHL outcome, possibly by interfering with the action of methotrexate with significant effects on toxicity and survival.
0.218563
Our data suggest that <span class="gene" id="17488658-15-22-27">MTHFR</span> gene variants play a critical role in <span class="disease" id="17488658-15-66-69">NHL</span> outcome, possibly by interfering with the action of methotrexate with significant effects on toxicity and survival.
CTD_human
1
0
Therapeutic
C0009319
Colitis
disease
colitis
3565
IL4
interleukin-4
CTD_human
24,314,293
Effects of interleukin-4 or interleukin-10 gene therapy on trinitrobenzenesulfonic acid-induced murine colitis.
0.201099
Effects of <span class="gene" id="24314293-0-11-24">interleukin-4</span> or interleukin-10 gene therapy on trinitrobenzenesulfonic acid-induced murine <span class="disease" id="24314293-0-103-110">colitis</span>.
CTD_human
1
0
Biomarker
C0149925
Small cell carcinoma of lung
disease
SCLC
3815
KIT
c-kit
CTD_human
15,499,612
The level of c-kit mRNA expression was variable in SCLC tumors (positive for 2 of 4 xenografts), and c-kit protein was not detected by immunohistochemistry.
0.2107
The level of c-kit mRNA expression was variable in <span class="disease" id="15499612-4-51-55">SCLC</span> tumors (positive for 2 of 4 xenografts), and <span class="gene" id="15499612-4-101-106">c-kit</span> protein was not detected by immunohistochemistry.
CTD_human
null
null
Negative
MESH:C564650
null
null
GIST
5156
null
PDGFRa
null
28,013,691
Inclusion criterias were: advanced GIST, expressing KIT or PDGFRa mutation.
null
null
null
1
0
Therapeutic
C0021390
Inflammatory Bowel Diseases
group
inflammatory bowel disease
8876
VNN1
pantetheinase
CTD_human
17,145,956
Thus, the Vanin-1/pantetheinase activity might be a new target for therapeutic intervention in inflammatory bowel disease.
0.200275
Thus, the <span class="gene" id="17145956-7-10-17">Vanin-1</span>/<span class="gene" id="17145956-7-18-31">pantetheinase</span> activity might be a new target for therapeutic intervention in <span class="disease" id="17145956-7-95-121">inflammatory bowel disease</span>.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumor
21926
null
TNF-alpha
null
28,137,091
Tumor regression was associated with the production of the Th1-cytokines, IFN-gamma and TNF-alpha by tumor-infiltrating CD4+ and CD8+ T cells within 1 week of treatment initiation.
null
null
null
null
null
Negative
MESH:D000377
null
null
time to pregnancy
7538
null
TTP
null
28,061,371
Women (n=94) with planned pregnancies of 5-20 weeks gestation completed a comprehensive physician-administered study questionnaire and reported the number of menstrual cycles attempting to conceive as the time to pregnancy (TTP).
null
null
null
4
7
Biomarker
C0022595
Keratosis Follicularis
disease
DD
488
ATP2A2
SERCA2
CTD_human
20,338,123
Darier disease (DD) and Hailey-Hailey disease (HHD) are rare autosomal dominantly inherited genodermatoses with mutations in the respective genes, ATP2A2 and ATP2C1, that encode the respective calcium adenosine triphosphatases SERCA2 and PMRI/SPCA1.
0.723762
<span class="disease" id="20338123-1-0-14">Darier disease</span> (<span class="disease" id="20338123-1-16-18">DD</span>) and Hailey-Hailey disease (HHD) are rare autosomal dominantly inherited genodermatoses with mutations in the respective genes, <span class="gene" id="20338123-1-147-153">ATP2A2</span> and ATP2C1, that encode the respective calcium adenosine triphosphatases <span class="gene" id="20338123-1-227-233">SERCA2</span> and PMRI/SPCA1.
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:D020299
null
null
HICH
268
null
MIS
null
28,096,671
Therefore, this meta-analysis was conducted to systematically assess whether the addition of local MHT (LMHT) could significantly improve the efficacy of minimally invasive surgery (MIS) in treating HICH.
null
null
null
null
null
Negative
MESH:D018805
null
null
sepsis
11596
null
RAGE
null
28,052,995
These findings demonstrate the role for RAGE-dependent IL-10 suppression as a key modulator of mortality from Gram-negative sepsis.
null
null
null
2
1
Biomarker
C0038505
Sturge-Weber Syndrome
disease
Sturge-Weber syndrome
2776
GNAQ
GNAQ
CTD_human
23,656,586
Sturge-Weber syndrome and port-wine stains caused by somatic mutation in GNAQ.
0.601374
<span class="disease" id="23656586-0-0-21">Sturge-Weber syndrome</span> and port-wine stains caused by somatic mutation in <span class="gene" id="23656586-0-73-77">GNAQ</span>.
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:D018805
null
null
sepsis
15289
null
HMGB-1
null
28,145,460
CGA-JK3 consequently interrupted IKKb-inducible NF-kB activation and NF-kB-regulated expression of TNF-a, IL-1a or HMGB-1 gene, thereby improving TLRs-associated redundant inflammatory responses in endotoxemia, polymicrobial sepsis and ALF.
null
null
null
null
null
Negative
MESH:D017827
null
null
WT
11647
null
TNAP
null
28,039,309
Decreased T cell activation was reproduced by the TNAP inhibitors levamisole, theophylline, and phenylalanine in WT cells.
null
null
null
1
0
Biomarker
C0235833
Congenital diaphragmatic hernia
disease
congenital diaphragmatic hernia
5292
PIM1
PIM-1
CTD_human
25,812,446
Increased expression of activated pSTAT3 and PIM-1 in the pulmonary vasculature of experimental congenital diaphragmatic hernia.
0.2
Increased expression of activated pSTAT3 and <span class="gene" id="25812446-0-45-50">PIM-1</span> in the pulmonary vasculature of experimental <span class="disease" id="25812446-0-96-127">congenital diaphragmatic hernia</span>.
CTD_human
null
null
Negative
MESH:D004342
null
null
hypersensitivity
16153
null
IL-10
null
28,054,242
We observed that SFN dose-dependently attenuated CCI-induced pain behavioral hypersensitivity, accompanied by reduction in pro-inflammatory cytokines (TNF-a, IL-1b, IL-6) and upregulation of an anti-inflammatory cytokine (IL-10).
null
null
null
null
null
Negative
MESH:D007249
null
null
inflammation
114132
null
Siglec-11
null
28,100,677
Here, we studied the inhibitory receptor Siglec-11 that shows uniquely human expression in brain microglia and engages endogenous polysialic acid to suppress inflammation.
null
null
null
1
0
Biomarker
C0019569
Hirschsprung Disease
disease
Hirschsprung's disease
407000
MIR218-1
miR-218-1
CTD_human
25,786,906
SLIT2/ROBO1-miR-218-1-RET/PLAG1: a new disease pathway involved in Hirschsprung's disease.
0.200275
SLIT2/ROBO1-<span class="gene" id="25786906-0-12-21">miR-218-1</span>-RET/PLAG1: a new disease pathway involved in <span class="disease" id="25786906-0-67-89">Hirschsprung's disease</span>.
CTD_human
1
0
Biomarker
C0020514
Hyperprolactinemia
disease
Hyperprolactinemia
2571
GAD1
GAD
CTD_human
7,138,674
Hyperprolactinemia induced by anterior pituitary homograft under the kidney capsule or systemic sulpiride injection significantly increases GAD activity.
0.2
<span class="disease" id="7138674-5-0-18">Hyperprolactinemia</span> induced by anterior pituitary homograft under the kidney capsule or systemic sulpiride injection significantly increases <span class="gene" id="7138674-5-140-143">GAD</span> activity.
CTD_human
null
null
Negative
MESH:D064146
null
null
CHT
963084
null
CPT11
null
28,014,096
We assessed the efficacy and tolerability of a ternary BW CPT11-OHP-infusional FU/FA combination in MCRC pts pretreated with CPT11 and/or OHP-based CHT using lower and potentially more tolerable doses.
null
null
null
3
0
Biomarker
C0021364
Male infertility
phenotype
male infertility
367
AR
androgen receptor
CTD_human
18,554,162
Thus in a very near future, for a comprehensive male infertility panel, it will be essential to include additional genetic tests, such as CFTR gene mutations, sperm mitochondrial DNA mutations, and androgen receptor gene mutations, besides the conventional chromosomal analyses, Y chromosome microdeletion detection, and sperm-FISH analyses.
0.2692
Thus in a very near future, for a comprehensive <span class="disease" id="18554162-11-48-64">male infertility</span> panel, it will be essential to include additional genetic tests, such as CFTR gene mutations, sperm mitochondrial DNA mutations, and <span class="gene" id="18554162-11-198-215">androgen receptor</span> gene mutations, besides the conventional chromosomal analyses, Y chromosome microdeletion detection, and sperm-FISH analyses.
CTD_human
null
null
Negative
MESH:D016301
null
null
bone loss
286779
null
ATP6V1H
null
28,158,191
These studies have uncovered a new, ATP6V1H-mediated pathway that regulates bone formation, and defines a new mechanism of disease that leads to bone loss.
null
null
null
1
0
Biomarker
C0013384
Dyskinetic syndrome
disease
dyskinesia
4988
OPRM1
mu opioid receptor
CTD_human
16,435,402
Carrying the G-allele of the A118G single nucleotide coding region polymorphism of the mu opioid receptor, as well as a history of never smoking, were independently associated with increased risk of earlier onset of dyskinesia (P=0.05 and 0.02, respectively).
0.200275
Carrying the G-allele of the A118G single nucleotide coding region polymorphism of the <span class="gene" id="16435402-5-87-105">mu opioid receptor</span>, as well as a history of never smoking, were independently associated with increased risk of earlier onset of <span class="disease" id="16435402-5-216-226">dyskinesia</span> (P=0.05 and 0.02, respectively).
CTD_human
null
null
Negative
MESH:C536769
null
null
Asian female
1956
null
epidermal growth factor receptor
null
28,029,530
INTRODUCTION: We examined the effect of access to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor (TKI) therapy on survival for Asian female (AF) EGFR mutation-enriched patients with advanced lung adenocarcinoma.
null
null
null
1
0
Biomarker
C0043459
Zellweger Syndrome
disease
Zellweger syndrome
5824
PEX19
PEX19
CTD_human
10,051,604
Human PEX19: cDNA cloning by functional complementation, mutation analysis in a patient with Zellweger syndrome, and potential role in peroxisomal membrane assembly.
0.4
Human <span class="gene" id="10051604-0-6-11">PEX19</span>: cDNA cloning by functional complementation, mutation analysis in a patient with <span class="disease" id="10051604-0-93-111">Zellweger syndrome</span>, and potential role in peroxisomal membrane assembly.
CTD_human;ORPHANET
null
null
Negative
MESH:D009369
null
null
cancer
574058
null
PD-L1
null
28,072,971
Results: The expression of PD-L1 and PD-1 in the tumor cells and interstitial lymphocytes in TNBC was significantly (P<0.05)higher than that in non-TNBC.In TNBC, the expression rates of PD-L1 in the cancer nests and stroma were 16.6%(25/151) and 25.2%(38/151)respectively.The former was positively correlated with tumor histological grade and lymph node metastasis (P<0.05), and the latter only with tumor histological grade (P<0.05).
null
null
null
null
null
Negative
MESH:D014652
null
null
vascular dysfunction
56632
null
SphK2
null
28,082,452
Specifically, SphK2 evolves as key player in immune cell trafficking and vascular dysfunction contributing to the development of overt hypertension.
null
null
null
null
null
Negative
MESH:D020176
null
null
hereditary tyrosinemia type 1
14085
null
fumarylacetoacetate hydrolase
null
28,192,681
Here, the integrase system was used to transfer the fumarylacetoacetate hydrolase (FAH) gene into the liver of mice affected with hereditary tyrosinemia type 1.
null
null
null
5
0
Biomarker
C0268419
Acatalasia
disease
acatalasemia
847
CAT
catalase
CTD_human
11,001,624
Anovel catalase mutation (a GA insertion) causes the Hungarian type of acatalasemia.
0.403571
Anovel <span class="gene" id="11001624-0-7-15">catalase</span> mutation (a GA insertion) causes the Hungarian type of <span class="disease" id="11001624-0-71-83">acatalasemia</span>.
CTD_human;ORPHANET
1
1
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
T2D
9861
PSMD6
PSMD6
CTD_human
22,158,537
The combined analysis identified eight new T2D loci reaching genome-wide significance, which mapped in or near GLIS3, PEPD, FITM2-R3HDML-HNF4A, KCNK16, MAEA, GCC1-PAX4, PSMD6 and ZFAND3.
0.200275
The combined analysis identified eight new <span class="disease" id="22158537-3-43-46">T2D</span> loci reaching genome-wide significance, which mapped in or near GLIS3, PEPD, FITM2-R3HDML-HNF4A, KCNK16, MAEA, GCC1-PAX4, <span class="gene" id="22158537-3-169-174">PSMD6</span> and ZFAND3.
CTD_human
1
0
Biomarker
C0023473
Myeloid Leukemia, Chronic
disease
CML
768
CA9
G250
CTD_human
17,157,168
Several LAAs are expressed in CML and therefore are candidate structures for specific immunotherapies: bcr-abl (100%), G250 (24%), hTERT (53%), MPP11 (91%), NEWREN60 (94%), PRAME (62%), Proteinase3 (71%), RHAMM/CD168 (83%), and WT1 (53%), but not BAGE, MAGE-A1, SSX2, or NY-ESO-1.
0.200275
Several LAAs are expressed in <span class="disease" id="17157168-3-30-33">CML</span> and therefore are candidate structures for specific immunotherapies: bcr-abl (100%), <span class="gene" id="17157168-3-119-123">G250</span> (24%), hTERT (53%), MPP11 (91%), NEWREN60 (94%), PRAME (62%), Proteinase3 (71%), RHAMM/CD168 (83%), and WT1 (53%), but not BAGE, MAGE-A1, SSX2, or NY-ESO-1.
CTD_human
null
null
Negative
MESH:D055370
null
null
lung injury
24338
null
ERK
null
28,057,160
Conclusion: Traditional Chinese medicine glabridin significantly ameliorated the lung injury induced by LPS in rats via reducing inflammation which caused by the inhibition of p38MAPK and ERK signaling pathway and antioxidant effect.
null
null
null
null
null
Negative
MESH:D002813
null
null
chondrosarcoma
7076
null
TIMP-1, type II collagen
null
28,035,378
Surgical pathological specimens were collected to detect MMP-1, MMP-13, TIMP-1, type II collagen and phosphorylated MAPK levels in normal cartilage, enchondroma and chondrosarcoma tissues.
null
null
null
2
0
Biomarker
C0017636
Glioblastoma
disease
glioblastomas
7052
TGM2
Tissue transglutaminase 2
CTD_human
16,170,020
Tissue transglutaminase 2 inhibition promotes cell death and chemosensitivity in glioblastomas.
0.200549
<span class="gene" id="16170020-0-0-25">Tissue transglutaminase 2</span> inhibition promotes cell death and chemosensitivity in <span class="disease" id="16170020-0-81-94">glioblastomas</span>.
CTD_human
2
0
Biomarker
C0029408
Degenerative polyarthritis
disease
osteoarthritis
4088
SMAD3
SMAD3
CTD_human
21,217,753
Mutations in SMAD3 cause a syndromic form of aortic aneurysms and dissections with early-onset osteoarthritis.
0.207953
Mutations in <span class="gene" id="21217753-0-13-18">SMAD3</span> cause a syndromic form of aortic aneurysms and dissections with early-onset <span class="disease" id="21217753-0-95-109">osteoarthritis</span>.
CTD_human
null
null
Negative
MESH:D002289
null
null
non-small cell lung cancer
116986
null
AGAP2
null
28,209,205
Recently, the lncRNA AGAP2-AS1 was identified as an oncogenic lncRNA in human non-small cell lung cancer (NSCLC) and its elevated expression was linked to NSCLC development and progression.
null
null
null
1
0
Biomarker
C0019151
Hepatic Encephalopathy
disease
HE
4988
OPRM1
mu-opioid receptor
CTD_human
11,991,257
The mean density of mu-opioid receptor sites (Bmax) in rats with stage II, III, and IV HE was 15, 29, and 33% higher, respectively, than the corresponding control value (p<0.01).
0.2
The mean density of <span class="gene" id="11991257-6-20-38">mu-opioid receptor</span> sites (Bmax) in rats with stage II, III, and IV <span class="disease" id="11991257-6-87-89">HE</span> was 15, 29, and 33% higher, respectively, than the corresponding control value (p&lt;0.01).
CTD_human
6
0
Biomarker
C0036572
Seizures
phenotype
seizures
1392
CRH
Corticotropin-releasing hormone
CTD_human
1,596,084
Corticotropin-releasing hormone-induced seizures in infant rats originate in the amygdala.
0.200275
<span class="gene" id="1596084-0-0-31">Corticotropin-releasing hormone</span>-induced <span class="disease" id="1596084-0-40-48">seizures</span> in infant rats originate in the amygdala.
CTD_human
null
null
Negative
MESH:D000163
null
null
AIDS
920
null
CD4
null
28,052,943
It is the fourth most common infection in AIDS (CD4 counts <100/mm(3)).
null
null
null
1
0
Biomarker
C0424295
Hyperactive behavior
phenotype
hyperactivity
26047
CNTNAP2
CNTNAP2
CTD_human
21,962,519
Cntnap2(-/-) mice show deficits in the three core ASD behavioral domains, as well as hyperactivity and epileptic seizures, as have been reported in humans with CNTNAP2 mutations.
0.400824
<span class="gene" id="21962519-4-0-7">Cntnap2</span>(-/-) mice show deficits in the three core ASD behavioral domains, as well as <span class="disease" id="21962519-4-85-98">hyperactivity</span> and epileptic seizures, as have been reported in humans with <span class="gene" id="21962519-4-160-167">CNTNAP2</span> mutations.
CTD_human;HPO
2
0
Biomarker
C0033860
Psoriasis
disease
psoriasis
79092
CARD14
CARD14
CTD_human
24,212,883
We discovered two independent missense SNVs in IL23R and GJB2 of low frequency and five common missense SNVs in LCE3D, ERAP1, CARD14 and ZNF816A associated with psoriasis at genome-wide significance.
0.205495
We discovered two independent missense SNVs in IL23R and GJB2 of low frequency and five common missense SNVs in LCE3D, ERAP1, <span class="gene" id="24212883-2-126-132">CARD14</span> and ZNF816A associated with <span class="disease" id="24212883-2-161-170">psoriasis</span> at genome-wide significance.
CTD_human
null
null
Negative
MESH:D005199
null
null
FA
672;675
null
BRCA-1/2
null
28,022,858
Evaluate biomarkers in primary tumor that could predict response to PARPi such as BRCA-1/2, FANCD2 nuclear foci formation (using the FA Triple Stain Immunofluroscence test/FATSI) and expression of miR 155 (oncogenic miR that targets DNA repair genes).
null
null
null
null
null
Negative
MESH:C536657
null
null
TNF
5970
null
RELA
null
28,039,105
In BEAS-2B cells, TNF recruited RELA, the main NF-kB transactivating subunit, to a 3' region of the TNF gene.
null
null
null
null
null
Negative
MESH:C565169
null
null
C3-deficient
12902
null
CR2
null
28,045,880
RESULTS: Allografts in C3-deficient or CR2-Crry-treated recipients were protected from skin and muscle ischemia-reperfusion injury (IRI).
null
null
null
null
null
Negative
MESH:D046150
null
null
Growth hormone receptor deficiency
3479
null
insulin-like growth factor 1
null
28,073,935
UNASSIGNED: Growth hormone receptor deficiency (GHRD) results in short stature, enhanced insulin sensitivity, and low circulating levels of insulin and insulin-like growth factor 1 (IGF-1).
null
null
null
null
null
Negative
MESH:D046351
null
null
EPP
9518
null
growth differentiation factor (GDF) 15
null
28,185,024
Among EPP patients, PPIX concentrations correlated with both growth differentiation factor (GDF) 15 (p = 0.012) and male gender (p = 0.015).
null
null
null
null
null
Negative
MESH:D000795
null
null
ALPHA
328
null
APEX-AMI
null
28,029,531
The ALPHA, GRACE 2.0, APEX-AMI, and CADILLAC models predicted 30-day mortality better than the PAMI score (p=0.005, 0.004, 0.01, and 0.02, respectively).
null
null
null
null
null
Negative
MESH:D002289
null
null
NSCLC
81897
null
TLR9
null
28,015,116
This study examines the enhancement of paclitaxel (Taxol ) chemotherapy by concomitant immunomodulation with ProMune( ) (CPG 7909), a TLR9 agonist which is currently in a clinical trial for NSCLC.
null
null
null
null
null
Negative
MESH:D000592
null
null
RA
232174
null
Cyp26b1
null
28,111,553
Robust expression of RA-degrading enzymes Cyp26b1 and Cyp26c1 in developing murine teeth suggested RA excess would reduce tooth hard tissue mineralization, adversely affecting enamel.
null
null
null
null
null
Negative
MESH:D064726
null
null
triple-negative breast cancer
5861
null
RAB1A
null
28,184,936
In this investigation, RAB1A siRNA was successfully transfected in MDA-MB-231 and BT-549 human triple-negative breast cancer cells, and verified by real -time quantitative polymerase chain reaction and western blotting.
null
null
null
null
null
Negative
MESH:D003643
null
null
death
24835
null
TNF-a
null
28,052,015
We found that 14,15-EET protected rat nucleus pulposus (NP) cells against death induced by treatment with H2O2and TNF-a in vitro.
null
null
null
null
null
Negative
MESH:D007938
null
null
leukemias
22778
null
Ikaros
null
28,190,000
Notably, leukemias driven by combined BCR-ABL1 expression and Ikaros suppression rapidly regress when endogenous Ikaros is restored, causing sustained disease remission or ablation.
null
null
null
null
null
Negative
MESH:D006073
null
null
gout
71481
null
alpha kinase 1
null
28,039,413
Three alpha kinase 1 ( ALPK1 ) and SLC22A12 loci associated with high gout risk and uric acid levels were genotyped.
null
null
null
3
0
Biomarker
C1832200
Peroxisome biogenesis disorders
group
peroxisome biogenesis disorders
5194
PEX13
PEX13
CTD_human
10,332,040
Nonsense and temperature-sensitive mutations in PEX13 are the cause of complementation group H of peroxisome biogenesis disorders.
0.200824
Nonsense and temperature-sensitive mutations in <span class="gene" id="10332040-0-48-53">PEX13</span> are the cause of complementation group H of <span class="disease" id="10332040-0-98-129">peroxisome biogenesis disorders</span>.
CTD_human
null
null
Negative
MESH:D009369
null
null
tumor
56338
null
TXNIP
null
28,029,659
Gene microarray analysis was performed and tumor suppressor gene TXNIP was found to be significantly increased in RNF2 knockdown cells.
null
null
null
8
9
Biomarker
C0265306
Greig cephalopolysyndactyly syndrome
disease
GCPS
2737
GLI3
GLI3
CTD_human
14,608,643
We conclude that patients with GCPS caused by large deletions that include GLI3 are likely to have cognitive deficits, and we hypothesize that this severe GCPS phenotype is caused by deletion of contiguous genes.
0.687418
We conclude that patients with <span class="disease" id="14608643-10-31-35">GCPS</span> caused by large deletions that include <span class="gene" id="14608643-10-75-79">GLI3</span> are likely to have cognitive deficits, and we hypothesize that this severe <span class="disease" id="14608643-10-155-159">GCPS</span> phenotype is caused by deletion of contiguous genes.
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:C536589
null
null
AS
112939
null
Nacc1
null
28,157,508
Further analyses of the zinc finger protein Zfp871 and BTB/POZ domain transcription factor Nacc1, which regulate neural and stem cell AS programs, respectively, reveal roles in controlling the expression of specific splicing regulators.
null
null
null
2
0
Biomarker
C0035455
Rhinitis
disease
rhinitis
7432
VIP
VIP
CTD_human
14,680,090
In comparison to the control, the aspirin-sensitive rhinitis group had a significant increase of VIP-like immunoreactivity in mucosal nerve fibres.
0.2
In comparison to the control, the aspirin-sensitive <span class="disease" id="14680090-5-52-60">rhinitis</span> group had a significant increase of <span class="gene" id="14680090-5-97-100">VIP</span>-like immunoreactivity in mucosal nerve fibres.
CTD_human
null
null
Negative
MESH:D009410
null
null
axonal degeneration
398223
null
APP
null
28,008,944
UNASSIGNED: Amyloid precursor protein (APP), commonly associated with Alzheimer's disease, also marks axonal degeneration.
null
null
null
null
null
Negative
MESH:D000377
null
null
time-to-progression
11047
null
Arm 1
null
28,045,335
RESULTS: Median time-to-progression (TTP) in Arm 1 was 7.9 months versus 9.2 in Arm 2.
null
null
null
null
null
Negative
MESH:D057772
null
null
vascular injury
723814
null
miR-223
null
28,196,816
The increased miR-223 in ECs could work as a novel endocrine genetic signal and participate in vascular injury of KD.
null
null
null
1
0
Biomarker
C0018798
Congenital Heart Defects
group
congenital heart defects
4524
MTHFR
MTHFR
CTD_human
16,524,890
Maternal MTHFR 677C>T is a risk factor for congenital heart defects: effect modification by periconceptional folate supplementation.
0.247773
Maternal <span class="gene" id="16524890-0-9-14">MTHFR</span> 677C&gt;T is a risk factor for <span class="disease" id="16524890-0-43-67">congenital heart defects</span>: effect modification by periconceptional folate supplementation.
CTD_human
null
null
Negative
MESH:C536528
null
null
LPS
17709
null
COX-2
null
28,152,476
They also increased COX-2, 5-LOX, and iNOS concentration in macrophages, which was comparable to that of LPS stimulated macrophages.
null
null
null
2
0
Biomarker
C0013295
Duodenal Ulcer
disease
duodenal ulcers
4843
NOS2
NOS
CTD_human
12,481,160
We investigated the effects of COX and NOS inhibitors on the healing of duodenal ulcers, in comparison with gastric ulcers, in rats.
0.2
We investigated the effects of COX and <span class="gene" id="12481160-2-39-42">NOS</span> inhibitors on the healing of <span class="disease" id="12481160-2-72-87">duodenal ulcers</span>, in comparison with gastric ulcers, in rats.
CTD_human
null
null
Negative
MESH:D000544
null
null
Alzheimer's disease
19164
null
PS1
null
28,132,667
However, the functional outcome of PS1 phosphorylation and its significance for Alzheimer's disease (AD) pathogenesis is poorly understood.
null
null
null
69
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensin II
CTD_human
1,860,718
Furthermore, acute hypertension induced by angiotensin II or phenylephrine did not affect the plasma irET-1 concentration in rats.
0.52
Furthermore, acute <span class="disease" id="1860718-9-19-31">hypertension</span> induced by <span class="gene" id="1860718-9-43-57">angiotensin II</span> or phenylephrine did not affect the plasma irET-1 concentration in rats.
CTD_human
null
null
Negative
MESH:D011475
null
null
OS
3480
null
IGF-1R
null
28,022,168
An OS benefit was gained with H+XP/FP regardless of IGF-1R levels or cutoffs applied.
null
null
null