NofPmids
float64
1
96
NofSnps
float64
0
1.07k
associationType
stringclasses
3 values
diseaseId
stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
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1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
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stringlengths
2
69
originalSource
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1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
1
0
Biomarker
C0025202
melanoma
disease
melanoma
6392
SDHD
SDHD
CTD_human
25,261,935
SDHD promoter mutations are frequent in melanoma and are associated with reduced gene expression and poor prognosis.
0.200549
<span class="gene" id="25261935-7-0-4">SDHD</span> promoter mutations are frequent in <span class="disease" id="25261935-7-40-48">melanoma</span> and are associated with reduced gene expression and poor prognosis.
CTD_human
1
0
Biomarker
C0400966
Non-alcoholic Fatty Liver Disease
disease
NAFLD
2950
GSTP1
GSTP1
CTD_human
23,643,483
This is the first report to show that the combination of current-smoking and harboring high-risk GSTM1, GSTP1 and/or GSTA1 genotypes is interactively associated with the risk of NAFLD.
0.200824
This is the first report to show that the combination of current-smoking and harboring high-risk GSTM1, <span class="gene" id="23643483-8-104-109">GSTP1</span> and/or GSTA1 genotypes is interactively associated with the risk of <span class="disease" id="23643483-8-178-183">NAFLD</span>.
CTD_human
null
null
Negative
MESH:D006009
null
null
AMD
7852
null
CXCR4
null
28,134,535
An HPMA-based polymeric prodrug of a CXCR4 antagonist, AMD3465 (P-SS-AMD), was developed as a dual-function carrier of therapeutic miRNA.
null
null
null
null
null
Negative
MESH:D001943
null
null
breast cancer
13649
null
epidermal growth factor receptor
null
28,178,603
Here, we show that exosomes can efficiently deliver microRNA (miRNA) to epidermal growth factor receptor (EGFR)-expressing breast cancer cells.
null
null
null
null
null
Negative
MESH:D008477
null
null
mediastinal disease
51371
null
POMP
null
28,020,187
Pts with mediastinal disease received radiation therapy followed by 24 cycles of vincristine, prednisone, mercaptopurine, methotrexate (POMP maintenance).
null
null
null
3
0
Biomarker
C0008370
Cholestasis
disease
cholestasis
1244
ABCC2
Mrp2
CTD_human
22,521,610
ANIT-induced biliary injury is a commonly used model of experimental cholestasis and has been shown to be dependent upon Mrp2-mediated efflux of an ANIT glutathione conjugate that selectively injures biliary epithelial cells.
0.282198
ANIT-induced biliary injury is a commonly used model of experimental <span class="disease" id="22521610-6-69-80">cholestasis</span> and has been shown to be dependent upon <span class="gene" id="22521610-6-121-125">Mrp2</span>-mediated efflux of an ANIT glutathione conjugate that selectively injures biliary epithelial cells.
CTD_human
1
0
Biomarker
C0004352
Autistic Disorder
disease
autistic
5443
POMC
pro-opiomelanocortin
CTD_human
8,570,775
These results suggest a possible linkage between abnormal plasma chemistries, especially those related to the pro-opiomelanocortin system, and autistic symptoms.
0.201099
These results suggest a possible linkage between abnormal plasma chemistries, especially those related to the <span class="gene" id="8570775-8-110-130">pro-opiomelanocortin</span> system, and <span class="disease" id="8570775-8-143-151">autistic</span> symptoms.
CTD_human
1
0
Biomarker
C0023434
Chronic Lymphocytic Leukemia
disease
chronic lymphocytic leukemia
23451
SF3B1
SF3B1
CTD_human
22,158,541
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia.
0.208517
Exome sequencing identifies recurrent mutations of the splicing factor <span class="gene" id="22158541-0-71-76">SF3B1</span> gene in <span class="disease" id="22158541-0-85-113">chronic lymphocytic leukemia</span>.
CTD_human
null
null
Negative
MESH:C536415
null
null
AR
22371
null
vWF
null
28,057,038
Changes in the above molecules were detected upon inhibiting NOX4 or AR, and serum H2O2 and vWF levels were measured in vivo.
null
null
null
6
24
Biomarker
C0403814
Congenital bilateral aplasia of vas deferens
disease
CAVD
1080
CFTR
CFTR
CTD_human
10,875,853
Congenital absence of the vas deferens (CAVD) is a heterogeneous disorder, largely due to mutations in the cystic fibrosis (CFTR) gene.
0.711528
Congenital absence of the vas deferens (<span class="disease" id="10875853-1-40-44">CAVD</span>) is a heterogeneous disorder, largely due to mutations in the cystic fibrosis (<span class="gene" id="10875853-1-124-128">CFTR</span>) gene.
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:C536528
null
null
LPS
3596
null
IL-13
null
28,212,865
CKIP-1 expression was strongly induced by pro-inflammatory M1 stimuli (LPS and IFN-y) and robustly suppressed by M2 stimuli (IL-4 and IL-13) in human and murine macrophage.
null
null
null
null
null
Negative
MESH:D057180
null
null
frontotemporal dementia
23435
null
TDP-43
null
28,007,900
This finding prompted us to re-analyze published datasets from a recent report on TDP-43, an RBP implicated in amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), as it was demonstrated that TDP-43 represses cryptic exon splicing to promote cell survival.
null
null
null
2
0
Biomarker
C0004352
Autistic Disorder
disease
autism
4897
NRCAM
NRCAM
CTD_human
18,664,314
Association of the neuronal cell adhesion molecule (NRCAM) gene variants with autism.
0.286188
Association of the <span class="gene" id="18664314-0-19-50">neuronal cell adhesion molecule</span> (<span class="gene" id="18664314-0-52-57">NRCAM</span>) gene variants with <span class="disease" id="18664314-0-78-84">autism</span>.
CTD_human
null
null
Negative
MESH:D011471
null
null
PCa
381379
null
Med19
null
28,125,713
However, the roles of Med19 in PCa are still obscure.
null
null
null
1
0
Biomarker
C0034069
Pulmonary Fibrosis
disease
pulmonary fibrosis
3146
HMGB1
HMGB1
CTD_human
27,616,297
Mounting evidence indicates that high-mobility group box 1 (HMGB1) is involved in pulmonary fibrosis.
0.203008
Mounting evidence indicates that <span class="gene" id="27616297-2-33-58">high-mobility group box 1</span> (<span class="gene" id="27616297-2-60-65">HMGB1</span>) is involved in <span class="disease" id="27616297-2-82-100">pulmonary fibrosis</span>.
CTD_human
null
null
Negative
MESH:D001249
null
null
asthma
260431
null
COPD
null
28,100,233
COPD and asthma are important chronic inflammatory disorders with a high associated morbidity.
null
null
null
1
0
Biomarker
C0026764
Multiple Myeloma
disease
MM
2052
EPHX1
microsomal epoxide hydrolase
CTD_human
16,949,155
Individuals who carried polymorphisms for GSTT1 null and/or high activity microsomal epoxide hydrolase (mEH 113YY+139HR or 113YY+139RR or 113YH+139RR) and/or low activity NAD(P)H:quinone oxidoreductase 1 (NQO1 187PS/SS) were 1.65, 2.49 and 13 times more likely to have MM (P(trend)=0.001).
0.205638
Individuals who carried polymorphisms for GSTT1 null and/or high activity <span class="gene" id="16949155-3-74-102">microsomal epoxide hydrolase</span> (mEH 113YY+139HR or 113YY+139RR or 113YH+139RR) and/or low activity NAD(P)H:quinone oxidoreductase 1 (NQO1 187PS/SS) were 1.65, 2.49 and 13 times more likely to have <span class="disease" id="16949155-3-269-271">MM</span> (P(trend)=0.001).
CTD_human
1
0
Biomarker
C3494422
Retrognathia
disease
retrognathia
5396
PRRX1
PRRX1
CTD_human
23,444,262
We studied the PRRX1 gene in a non-consanguineous Indonesian female infant who was diagnosed prenatally with severe retrognathia (bilateral Pruzansky type III).
0.200275
We studied the <span class="gene" id="23444262-2-15-20">PRRX1</span> gene in a non-consanguineous Indonesian female infant who was diagnosed prenatally with severe <span class="disease" id="23444262-2-116-128">retrognathia</span> (bilateral Pruzansky type III).
CTD_human
3
0
Biomarker
C0025202
melanoma
disease
melanoma
2194
FASN
Fatty acid synthase
CTD_human
18,770,866
Fatty acid synthase inhibition with Orlistat promotes apoptosis and reduces cell growth and lymph node metastasis in a mouse melanoma model.
0.200549
<span class="gene" id="18770866-0-0-19">Fatty acid synthase</span> inhibition with Orlistat promotes apoptosis and reduces cell growth and lymph node metastasis in a mouse <span class="disease" id="18770866-0-125-133">melanoma</span> model.
CTD_human
3
0
Biomarker
C0553580
Ewings sarcoma
disease
Ewing sarcoma
2313
FLI1
FLI1
CTD_human
26,214,589
Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite.
0.421913
Chimeric EWSR1-<span class="gene" id="26214589-0-15-19">FLI1</span> regulates the <span class="disease" id="26214589-0-34-47">Ewing sarcoma</span> susceptibility gene EGR2 via a GGAA microsatellite.
CTD_human;ORPHANET
null
null
Negative
OMIM:135300
null
null
HGF
7422
null
VEGF
null
28,136,573
METHODS: The dtectDx Breast test measures the concentrations of IL-8, IL-12, VEGF, CEA, and HGF via ELISA.
null
null
null
null
null
Negative
MESH:D020241
null
null
WD
24088;142980;21898
null
TLR2, 4
null
28,094,890
C57BL/6J mice deficient for TLR2, 4, 9, or NOD2 and wild-type (WT) were fed a WD or a standard diet for 3 months.
null
null
null
null
null
Negative
MESH:D003920
null
null
diabetic
24835
null
TNF-a
null
28,054,921
The messenger ribonucleic acid expression of TNF-a and COX- 2 in DEP-treated fibroblasts increased in both normal and diabetic fibroblasts, while IL-6 expression remained unchanged.
null
null
null
6
14
Biomarker
C0175701
Aarskog syndrome
disease
Aarskog-Scott syndrome
2245
FGD1
FGD1
CTD_human
10,930,571
A mutation in the pleckstrin homology (PH) domain of the FGD1 gene in an Italian family with faciogenital dysplasia (Aarskog-Scott syndrome).
0.607967
A mutation in the pleckstrin homology (PH) domain of the <span class="gene" id="10930571-0-57-61">FGD1</span> gene in an Italian family with <span class="disease" id="10930571-0-93-115">faciogenital dysplasia</span> (<span class="disease" id="10930571-0-117-139">Aarskog-Scott syndrome</span>).
CTD_human;ORPHANET;UNIPROT
null
null
Negative
MESH:D007249
null
null
inflammation
25107
null
Avpr1a
null
28,105,924
Four of them (Avpr1a, Hsd11b2, Agt, Ephx2) may provoke the hypertension development, and Mpo may contribute to insulin resistance and inflammation in the ISIAH rats.
null
null
null
1
0
Biomarker
C0014175
Endometriosis
disease
endometriosis
5076
PAX2
Paired-box gene 2
CTD_human
22,473,392
Paired-box gene 2 is down-regulated in endometriosis and correlates with low epidermal growth factor receptor expression.
0.200275
<span class="gene" id="22473392-0-0-17">Paired-box gene 2</span> is down-regulated in <span class="disease" id="22473392-0-39-52">endometriosis</span> and correlates with low epidermal growth factor receptor expression.
CTD_human
null
null
Negative
MESH:D012772
null
null
septic shock
6962
null
T cell receptor
null
28,072,859
The objectives of this study were 1) to determine the relation of lymphocyte dysfunction to viral reactivation and mortality, and 2) to evaluate recovery of lymphocyte function during septic shock, including T cell receptor (TCR) diversity and the expression of programmed death 1 (PD-1).
null
null
null
1
0
Biomarker
C0002395
Alzheimer's Disease
disease
Alzheimer disease
7019
TFAM
TFAM
CTD_human
17,192,785
In addition to identifying the epsilon4 allele of APOE and related effects, we pinpointed over a dozen potential Alzheimer disease susceptibility genes (ACE, CHRNB2, CST3, ESR1, GAPDHS, IDE, MTHFR, NCSTN, PRNP, PSEN1, TF, TFAM and TNF) with statistically significant allelic summary odds ratios (ranging from 1.11-1.38 for risk alleles and 0.92-0.67 for protective alleles).
0.223363
In addition to identifying the epsilon4 allele of APOE and related effects, we pinpointed over a dozen potential <span class="disease" id="17192785-5-113-130">Alzheimer disease</span> susceptibility genes (ACE, CHRNB2, CST3, ESR1, GAPDHS, IDE, MTHFR, NCSTN, PRNP, PSEN1, TF, <span class="gene" id="17192785-5-222-226">TFAM</span> and TNF) with statistically significant allelic summary odds ratios (ranging from 1.11-1.38 for risk alleles and 0.92-0.67 for protective alleles).
CTD_human
null
null
Negative
MESH:D001506
null
null
BWS
174
null
alpha-fetoprotein
null
28,160,403
Until recently, this screening has been employed uniformly across all genetic and epigenetic causes of BWS, including the utilization of ultrasonography to detect abdominal tumors and alpha-fetoprotein (AFP) to detect hepatoblastoma.
null
null
null
null
null
Negative
MESH:D064420
null
null
toxicity
404306
null
EGFR
null
28,193,671
eBAT abated expected toxicity associated with EGFR targeting, a finding supported by mouse studies.
null
null
null
69
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensinogen
CTD_human
21,393,355
The hypertensive double-transgenic (dTG) rat strain, expressing human renin and angiotensinogen, develops severe hypertension and organ damage and 50% of individuals die by 7 weeks of age.
0.52
The hypertensive double-transgenic (dTG) rat strain, expressing human renin and <span class="gene" id="21393355-1-80-95">angiotensinogen</span>, develops severe <span class="disease" id="21393355-1-113-125">hypertension</span> and organ damage and 50% of individuals die by 7 weeks of age.
CTD_human
null
null
Negative
MESH:D001943
null
null
breast cancer
2099;5241
null
Estrogen Receptor and Progesterone Receptor
null
28,009,468
We present an automated method for co-localized scoring of Estrogen Receptor and Progesterone Receptor (ER/PR) in breast cancer core biopsies using whole slide images.
null
null
null
3
2
Biomarker
C0035334
Retinitis Pigmentosa
disease
RP
23418
CRB1
CRB1
CTD_human
10,508,521
In ten unrelated RP patients with preserved para-arteriolar RPE, we identified a homozygous AluY insertion disrupting the ORF, five homozygous missense mutations and four compound heterozygous mutations in CRB1.
0.610634
In ten unrelated <span class="disease" id="10508521-7-17-19">RP</span> patients with preserved para-arteriolar RPE, we identified a homozygous AluY insertion disrupting the ORF, five homozygous missense mutations and four compound heterozygous mutations in <span class="gene" id="10508521-7-206-210">CRB1</span>.
CTD_human;HPO;ORPHANET
null
null
Negative
MESH:D014923
null
null
WAS
884548
null
CT750
null
28,036,832
IMAGES WERE OBTAINED VIA HELICAL SCANS THAT WERE PERFORMED USING A GE DISCOVERY CT750 HD WITH THE COPD GENE/SARP PROTOCOLS EXCEPT TUBE CURRENT WAS VARIED FROM 790 TO 50 MA, AND LUNG INFLATION WAS FIXED VIA MECHANICAL VENTILATOR.
null
null
null
7
0
Biomarker
C0001206
Acromegaly
disease
acromegaly
2688
GH1
growth hormone
CTD_human
18,388,193
Epithelial sodium channel is a key mediator of growth hormone-induced sodium retention in acromegaly.
0.210714
Epithelial sodium channel is a key mediator of <span class="gene" id="18388193-0-47-61">growth hormone</span>-induced sodium retention in <span class="disease" id="18388193-0-90-100">acromegaly</span>.
CTD_human
null
null
Negative
MESH:D003677
null
null
SHOX deficiency
2688
null
growth hormone
null
28,002,818
BACKGROUND/AIMS: To assess auxological and safety data for growth hormone (GH)-treated children with SHOX deficiency.
null
null
null
null
null
Negative
MESH:D030342
null
null
inherited disease
23479
null
ISCU
null
28,007,899
ISCU myopathy is an inherited disease that primarily affects individuals of northern Swedish descent who share a single point mutation in the fourth intron of the ISCU gene.
null
null
null
1
0
Biomarker
C0079154
Congenital Nonbullous Ichthyosiform Erythroderma
disease
lamellar ichthyosis
26154
ABCA12
ABCA12
CTD_human
16,675,967
No de novo mutation in ABCA12 has yet been reported either in HI or lamellar ichthyosis.
0.409572
No de novo mutation in <span class="gene" id="16675967-10-23-29">ABCA12</span> has yet been reported either in HI or <span class="disease" id="16675967-10-68-87">lamellar ichthyosis</span>.
CTD_human;ORPHANET
3
3
Biomarker
C0242383
Age related macular degeneration
disease
Age-related macular degeneration
387715
ARMS2
LOC387715
CTD_human
18,511,946
Age-related macular degeneration is associated with an unstable ARMS2 (LOC387715) mRNA.
0.368536
<span class="disease" id="18511946-0-0-32">Age-related macular degeneration</span> is associated with an unstable <span class="gene" id="18511946-0-64-69">ARMS2</span> (<span class="gene" id="18511946-0-71-80">LOC387715</span>) mRNA.
CTD_human
null
null
Negative
MESH:D040181
null
null
XLH
5251
null
X-linked hypophosphatemic
null
28,194,480
UNASSIGNED: In X-linked hypophosphatemic (XLH) rickets, dual-energy X-ray absorptiometry (DXA) measurements must be analyzed with caution.
null
null
null
1
0
Biomarker
C0345967
Malignant mesothelioma
disease
malignant mesothelioma
7431
VIM
vimentin
CTD_human
22,784,439
Immunohistochemical analysis for epithelial membrane antigen, calretinin, vimentin, ?-catenin, melan-A, glucose transporter-1, cytokeratin CAM5.2, Wilms tumor antigen-1, D2-40, CD146, progesterone receptor, estrogen receptor, and cytokeratin 5/6 was indicative of malignant mesothelioma.
0.200275
Immunohistochemical analysis for epithelial membrane antigen, calretinin, <span class="gene" id="22784439-5-74-82">vimentin</span>, &beta;-catenin, melan-A, glucose transporter-1, cytokeratin CAM5.2, Wilms tumor antigen-1, D2-40, CD146, progesterone receptor, estrogen receptor, and cytokeratin 5/6 was indicative of <span class="disease" id="22784439-5-264-286">malignant mesothelioma</span>.
CTD_human
1
0
Biomarker
C0014175
Endometriosis
disease
endometriosis
5617
PRL
Prolactin
CTD_human
11,925,390
Prolactin and growth hormone secretion after thyrotrophin-releasing hormone infusion and dopaminergic (DA2) blockade in infertile patients with minimal/mild endometriosis.
0.201099
<span class="gene" id="11925390-0-0-9">Prolactin</span> and growth hormone secretion after thyrotrophin-releasing hormone infusion and dopaminergic (DA2) blockade in infertile patients with minimal/mild <span class="disease" id="11925390-0-157-170">endometriosis</span>.
CTD_human
null
null
Negative
MESH:D057180
null
null
FTD
64396
null
GCL
null
28,106,555
OBJECTIVE: To obtain cross-sectional information on RNFL and GCL-IPL thickness among MCI, AD, FTD, and healthy controls (HC), and their correlations with dementia severity.
null
null
null
2
1
Biomarker
C0011615
Dermatitis, Atopic
disease
AD
3596
IL13
IL-13
CTD_human
22,355,542
These studies indicate that IL-13 induces AD and atopic march via a TSLP dependent mechanism.
0.303676
These studies indicate that <span class="gene" id="22355542-6-28-33">IL-13</span> induces <span class="disease" id="22355542-6-42-44">AD</span> and atopic march via a TSLP dependent mechanism.
CTD_human
2
4
Biomarker
C0796176
STUVE-WIEDEMANN SYNDROME
disease
SWS
3977
LIFR
leukemia inhibitory factor receptor
CTD_human
19,603,067
The Stüve-Wiedemann Syndrome (SWS) is a frequently lethal chondrodysplasia caused by null mutations in the leukemia inhibitory factor receptor gene (LIFR) responsible for an impaired activation of the JAK-STAT pathway after LIF stimulation.
0.601923
The <span class="disease" id="19603067-1-4-28">Stüve-Wiedemann Syndrome</span> (<span class="disease" id="19603067-1-30-33">SWS</span>) is a frequently lethal chondrodysplasia caused by null mutations in the <span class="gene" id="19603067-1-107-142">leukemia inhibitory factor receptor</span> gene (LIFR) responsible for an impaired activation of the JAK-STAT pathway after LIF stimulation.
CTD_human;ORPHANET;UNIPROT
10
18
Biomarker
C0221018
Hereditary sideroblastic anemia
disease
X-linked sideroblastic anaemia
212
ALAS2
ALAS2
CTD_human
18,637,800
The most frequent form is X-linked sideroblastic anaemia, caused by mutations of delta-aminolevulinic acid synthase 2 (ALAS2), the enzyme that catalyses the first and regulatory step of haem synthesis in erythroid precursors and is post-transcriptionally controlled by the iron regulatory proteins.
0.60989
The most frequent form is <span class="disease" id="18637800-2-26-56">X-linked sideroblastic anaemia</span>, caused by mutations of delta-aminolevulinic acid synthase 2 (<span class="gene" id="18637800-2-119-124">ALAS2</span>), the enzyme that catalyses the first and regulatory step of haem synthesis in erythroid precursors and is post-transcriptionally controlled by the iron regulatory proteins.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0878544
Cardiomyopathies
group
cardiomyopathy
5563
PRKAA2
Prkaa2
CTD_human
21,037,199
A novel coexpression and integrated pathway network analysis indicated Prkaa2, Pdk2, Rhoj, and Sgcb are likely to play a central role in the pathophysiology of murine progressive cardiomyopathy in C3H/HeJ mice.
0.200275
A novel coexpression and integrated pathway network analysis indicated <span class="gene" id="21037199-7-71-77">Prkaa2</span>, Pdk2, Rhoj, and Sgcb are likely to play a central role in the pathophysiology of murine progressive <span class="disease" id="21037199-7-179-193">cardiomyopathy</span> in C3H/HeJ mice.
CTD_human
null
null
Negative
MESH:D018235
null
null
ASM
3791
null
phospho-VEGF receptor 2
null
28,056,993
METHODS: In order to elucidate the precise mechanism underlying the effect of 1,25(OH)2D3 on VEGF-induced ADAM33 expression and ASM cell proliferation, we tested the effects of 1,25(OH)2D3 on cell cycle progression and evaluated the levels of phospho-VEGF receptor 2 (VEGFR2), phospho-extracellular signal-regulated kinase 1/2 (ERK1/2), and phospho-Akt in VEGF-stimulated ASM cells.
null
null
null
null
null
Negative
MESH:D009203
null
null
MI
50689;116590
null
ERK1/2
null
28,039,938
CONCLUSIONS: The administration of P2X7 R RNAi during the acute inflammatory response phase prevented the process of sympathetic hyperinnervation after MI, which was associated in part with inhibiting the Akt and ERK1/2 pathways and NF-kB activation.
null
null
null
null
null
Negative
MESH:D053632
null
null
SCID
3560
null
CD122
null
28,164,571
1 x 107 SKM-1 cells were inoculated into anti-mouse CD122 monoantibody conditioned nonobese diabetic severe combined immunodeficiency (NOD/SCID) mice by intravenous injection.
null
null
null
1
0
Biomarker
C0001418
Adenocarcinoma
group
adenocarcinoma
1029
CDKN2A
p16
CTD_human
20,135,361
Implication of p16 inactivation in tumorigenic activity of respiratory epithelial cell lines and adenocarcinoma cell line established from plutonium-induced lung tumor in rat.
0.263722
Implication of <span class="gene" id="20135361-0-15-18">p16</span> inactivation in tumorigenic activity of respiratory epithelial cell lines and <span class="disease" id="20135361-0-97-111">adenocarcinoma</span> cell line established from plutonium-induced lung tumor in rat.
CTD_human
16
285
Biomarker
C0013264
Muscular Dystrophy, Duchenne
disease
Duchenne muscular dystrophy
1756
DMD
dystrophin
CTD_human
12,966,700
Aim of the study was to investigate whether the administration of gentamicin could restore dystrophin expression in striated muscles of patients with Duchenne muscular dystrophy caused by premature stop codon, as reported in mdx mice.
0.85109
Aim of the study was to investigate whether the administration of gentamicin could restore <span class="gene" id="12966700-1-91-101">dystrophin</span> expression in striated muscles of patients with <span class="disease" id="12966700-1-150-177">Duchenne muscular dystrophy</span> caused by premature stop codon, as reported in mdx mice.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C1136249
Mental Retardation, X-Linked
disease
X-linked mental retardation
2245
FGD1
FGD1
CTD_human
11,940,089
Non-syndromic X-linked mental retardation associated with a missense mutation (P312L) in the FGD1 gene.
0.203008
Non-syndromic <span class="disease" id="11940089-0-14-41">X-linked mental retardation</span> associated with a missense mutation (P312L) in the <span class="gene" id="11940089-0-93-97">FGD1</span> gene.
CTD_human
null
null
Negative
MESH:D018235
null
null
smooth muscle actin
7431
null
vimentin
null
28,022,216
The genes were crossed against approximately 200 clinically used antibodies; 3 were selected: thyroid transcription factor 1 (TTF1), smooth muscle actin (SMA), and vimentin (VIM).
null
null
null
1
0
Biomarker
C0023493
Adult T-Cell Lymphoma/Leukemia
disease
human T-Cell leukemia
7014
TERF2
TRF2
CTD_human
17,643,074
Telomere attrition and chromosome instability via downregulation of TRF2 contributes to arsenic trioxide-induced apoptosis of human T-Cell leukemia cell line molt-4 cells.
0.203282
Telomere attrition and chromosome instability via downregulation of <span class="gene" id="17643074-0-68-72">TRF2</span> contributes to arsenic trioxide-induced apoptosis of <span class="disease" id="17643074-0-126-147">human T-Cell leukemia</span> cell line molt-4 cells.
CTD_human
null
null
Negative
MESH:D001260
null
null
T-helper 2
16153
null
IL-10
null
28,078,033
Intravenous injection of BMSCs significantly reduced allergic symptoms, eosinophil infiltration, OVA-specific immunoglobulin E (IgE), T-helper 2 (Th2) cytokine profile (interleukin (IL)-4, IL-5 and IL-13) and regulatory cytokines (IL-10).
null
null
null
null
null
Negative
MESH:D009369
null
null
tumor
24494
null
interleukin-1beta
null
28,152,042
Western blot analysis was performed to determine protein expression of high-mobility group box 1 (HMGB1), toll-like receptor-4 (TLR-4), phosphorylated nuclear factor-kappa B (p-NF-kB), interleukin-1beta (IL-1b), tumor necrosis factor-alpha (TNF-a), phosphorylated inducible and endothelial nitric oxide synthase (p-iNOS, p-eNOS), Bcl-2, Bax, Cytochrome C, and caspase-3 in the brain.
null
null
null
3
0
Biomarker
C0004352
Autistic Disorder
disease
autistic
5649
RELN
Reelin
CTD_human
11,814,262
Dysregulation of Reelin and Bcl-2 proteins in autistic cerebellum.
0.232791
Dysregulation of <span class="gene" id="11814262-0-17-23">Reelin</span> and Bcl-2 proteins in <span class="disease" id="11814262-0-46-54">autistic</span> cerebellum.
CTD_human
null
null
Negative
MESH:D020295
null
null
Stemness
9332
null
CD163
null
28,114,366
Stemness features of tumoral hepatocytes (EpCAM, K19, Oct3/4, c-KIT, c-MET, and CD133), and tumor stromal cells expressing a-smooth muscle actin (a-SMA), CD68, CD163, and IL-6 were analyzed in 36 low grade dysplastic nodules (DNs), 48 high grade DNs, 30 early HCCs (eHCCs), and 51 progressed HCCs (pHCCs) by immunohistochemistry or real-time PCR.
null
null
null
1
0
Biomarker
C0024796
Marfan Syndrome
disease
MFS
4313
MMP2
MMP-2
CTD_human
18,178,469
This study demonstrates that doxycycline significantly delays aneurysm rupture in MFS-like mice by inhibiting expression of tissue MMP-2 and MMP-9 and thus, degradation of the elastic matrix.
0.200275
This study demonstrates that doxycycline significantly delays aneurysm rupture in <span class="disease" id="18178469-15-82-85">MFS</span>-like mice by inhibiting expression of tissue <span class="gene" id="18178469-15-131-136">MMP-2</span> and MMP-9 and thus, degradation of the elastic matrix.
CTD_human
7
0
Biomarker
C0040034
Thrombocytopenia
phenotype
thrombocytopenia
5196
PF4
PF4
CTD_human
8,282,825
These findings indicate that antibodies associated with HITP react with PF4 complexed with heparin in solution or with glycosaminoglycan molecules on the surface of endothelial cells and provide the basis for a new hypothesis to explain the development of thrombocytopenia with thrombosis or disseminated intravascular coagulation in patients sensitive to heparin.
0.204931
These findings indicate that antibodies associated with HITP react with <span class="gene" id="8282825-8-72-75">PF4</span> complexed with heparin in solution or with glycosaminoglycan molecules on the surface of endothelial cells and provide the basis for a new hypothesis to explain the development of <span class="disease" id="8282825-8-256-272">thrombocytopenia</span> with thrombosis or disseminated intravascular coagulation in patients sensitive to heparin.
CTD_human
null
null
Negative
MESH:D018455
null
null
S deficiency
5624
null
protein C
null
28,133,551
Coagulability workup returned positive for protein C and S deficiency.
null
null
null
68
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
5443
POMC
ACTH
CTD_human
15,110,907
These data suggest that EPO is not causal in ACTH-induced hypertension.
0.203846
These data suggest that EPO is not causal in <span class="gene" id="15110907-13-45-49">ACTH</span>-induced <span class="disease" id="15110907-13-58-70">hypertension</span>.
CTD_human
null
null
Negative
MESH:D011502
null
null
energy balance dysregulation
24241
null
CGRP
null
28,077,715
Here, we used neuroanatomical tracing, immunofluorescence, and confocal imaging to demonstrate that virtually all NTS > lPBN and lPBN > CeA CGRP projections coexpress vesicular glutamate transporter 2 (VGLUT2), providing evidence that excitatory projections mediate cisplatin-induced energy balance dysregulation.
null
null
null
null
null
Negative
MESH:D004194
null
null
multisystem disorder
9361
null
LONP1
null
28,148,925
UNASSIGNED: Cerebral, ocular, dental, auricular, skeletal (CODAS) syndrome is a rare autosomal recessive multisystem disorder caused by mutations in LONP1.
null
null
null
null
null
Negative
MESH:D005355
null
null
fibrosis
100508689
null
mucin
null
28,099,617
The diagnosis is based on four criteria: generalized papular and sclerodermoid lesions; mucin deposition, fibroblast proliferation, and fibrosis in the histopathology; monoclonal gammopathy; and no thyroid disorders.
null
null
null
null
null
Negative
MESH:D006332
null
null
splenic enlargement
28509
null
DM1
null
28,110,417
BACKGROUND: An association between trastuzumab-emtansine (T-DM1) and splenic enlargement is reported in preclinical data, and has been noted anecdotally in patients receiving T-DM1 at our institution.
null
null
null
1
0
Biomarker
C0020619
Hypogonadism
disease
hypogonadism
5617
PRL
PRL
CTD_human
15,829,128
Half of all men with prolactin (PRL)-producing macroadenomas present with hypogonadism, decreased libido and impotence, and therefore require testosterone replacement.
0.2
Half of all men with <span class="gene" id="15829128-1-21-30">prolactin</span> (<span class="gene" id="15829128-1-32-35">PRL</span>)-producing macroadenomas present with <span class="disease" id="15829128-1-74-86">hypogonadism</span>, decreased libido and impotence, and therefore require testosterone replacement.
CTD_human
3
0
Biomarker
C1832200
Peroxisome biogenesis disorders
group
peroxisome-biogenesis disorders
5194
PEX13
PEX13
CTD_human
10,441,568
PEX13 is mutated in complementation group 13 of the peroxisome-biogenesis disorders.
0.200824
<span class="gene" id="10441568-0-0-5">PEX13</span> is mutated in complementation group 13 of the <span class="disease" id="10441568-0-52-83">peroxisome-biogenesis disorders</span>.
CTD_human
null
null
Negative
MESH:D006984
null
null
Hypertrophic parameters
25402
null
caspase-3
null
28,181,211
Hypertrophic parameters, left ventricular (LV) remodelling, and gene expression of Apel, apelin receptor (Apelr), Bax, caspase-3 (Casp-3), and Bcl-2 by real-time polymerase chain reaction and cardiomyocytes apoptosis by TUNEL immunostaining were assessed on day 14 post-MI.
null
null
null
1
0
Biomarker
C0007124
Noninfiltrating Intraductal Carcinoma
disease
DCIS
768
CA9
CAIX
CTD_human
20,526,721
GLUT1 and CAIX were expressed only in DCIS (56.8% and 25.0%) and IDC (44.1% and 30.5%), with higher expression in high grade DCIS than low/intermediate grade DCIS (79.2% vs. 30.0%, p = 0.001 and 37.5% vs. 10.0%, p = 0.036, respectively).
0.200549
GLUT1 and <span class="gene" id="20526721-9-10-14">CAIX</span> were expressed only in <span class="disease" id="20526721-9-38-42">DCIS</span> (56.8% and 25.0%) and IDC (44.1% and 30.5%), with higher expression in high grade <span class="disease" id="20526721-9-125-129">DCIS</span> than low/intermediate grade DCIS (79.2% vs. 30.0%, p = 0.001 and 37.5% vs. 10.0%, p = 0.036, respectively).
CTD_human
null
null
Negative
MESH:D012891
null
null
sleep apnea
15369
null
heme oxygenase-2
null
28,115,703
Here, we report that mice deficient in heme oxygenase-2 (HO-2), which generates the gaseous molecule carbon monoxide (CO), exhibit sleep apnea characterized by high apnea and hypopnea indices during rapid eye movement (REM) sleep.
null
null
null
null
null
Negative
MESH:D009455
null
null
neurofibroma
23189
null
KANK1
null
28,067,315
Consistently, knockdown of KANK1 in neurofibroma cells promoted cell growth.
null
null
null
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
2944
GSTM1
GSTM1
CTD_human
16,472,391
Analysis of case-parent trios at a locus with a deletion allele: association of GSTM1 with autism.
0.205689
Analysis of case-parent trios at a locus with a deletion allele: association of <span class="gene" id="16472391-0-80-85">GSTM1</span> with <span class="disease" id="16472391-0-91-97">autism</span>.
CTD_human
null
null
Negative
MESH:C565469
null
null
IMD
39753
null
Diap1
null
28,085,885
We demonstrate that NF-kB/IMD signaling antagonizes apoptosis by up-regulating expression of the anti-apoptotic protein Diap1.
null
null
null
null
null
Negative
MESH:D007896
null
null
leishmaniasis
216799
null
NLRP3
null
28,192,528
Using murine models of inflammation induced by the protozoan parasite leishmania, and data obtained from patients with cutaneous leishmaniasis, we uncovered a previously unrecognized role for NLRP3 inflammasome activation and IL-1b release as a detrimental consequence of CD8+ T cell-mediated cytotoxicity, ultimately resulting in chronic inflammation.
null
null
null
1
0
Biomarker
C0406704
Rudiger syndrome 1
disease
EEC syndrome
8626
TP63
p63
CTD_human
11,462,173
The combined data show that p63 is the major gene for EEC syndrome, and that it makes a modest contribution to SHFM.
0.404945
The combined data show that <span class="gene" id="11462173-10-28-31">p63</span> is the major gene for <span class="disease" id="11462173-10-54-66">EEC syndrome</span>, and that it makes a modest contribution to SHFM.
CTD_human;ORPHANET
3
11
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes mellitus
3784
KCNQ1
KCNQ1
CTD_human
18,711,367
Variants in KCNQ1 are associated with susceptibility to type 2 diabetes mellitus.
0.297564
Variants in <span class="gene" id="18711367-0-12-17">KCNQ1</span> are associated with susceptibility to <span class="disease" id="18711367-0-56-80">type 2 diabetes mellitus</span>.
CTD_human
1
3
Biomarker
C0030567
Parkinson Disease
disease
PD
683
BST1
BST1
CTD_human
19,915,576
By comparing results of a GWAS performed on individuals of European ancestry, we identified PARK16, SNCA and LRRK2 as shared risk loci for PD and BST1 and MAPT as loci showing population differences.
0.211342
By comparing results of a GWAS performed on individuals of European ancestry, we identified PARK16, SNCA and LRRK2 as shared risk loci for <span class="disease" id="19915576-4-139-141">PD</span> and <span class="gene" id="19915576-4-146-150">BST1</span> and MAPT as loci showing population differences.
CTD_human
4
0
Biomarker
C0004352
Autistic Disorder
disease
autism
26047
CNTNAP2
CNTNAP2
CTD_human
21,310,003
We propose that these CNTNAP2 variants increase susceptibility to SLI or autism when they occur together with other risk factors.
0.304644
We propose that these <span class="gene" id="21310003-7-22-29">CNTNAP2</span> variants increase susceptibility to SLI or <span class="disease" id="21310003-7-73-79">autism</span> when they occur together with other risk factors.
CTD_human
1
0
Therapeutic
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
4090
SMAD5
Smad5
CTD_human
20,079,400
These finding reveals Smad5 as a potential target for the therapeutic of type 2 diabetes.
0.2
These finding reveals <span class="gene" id="20079400-9-22-27">Smad5</span> as a potential target for the therapeutic of <span class="disease" id="20079400-9-73-88">type 2 diabetes</span>.
CTD_human
null
null
Negative
MESH:D005909
null
null
GBM
387166
null
miR-148a
null
28,142,001
Inhibition of two "risky" miRNAs, miR-148a and miR-31, in orthotopic xenograft GBM mouse models suppressed tumor growth and thereby prolonged animal survival.
null
null
null
null
null
Negative
MESH:D007239
null
null
Controlled human malaria infection
11061
null
CHMI
null
28,081,133
Controlled human malaria infection (CHMI) in healthy human volunteers is an important and powerful tool in clinical malaria vaccine development.
null
null
null
2
0
Biomarker
C2940786
Thyroid Hormone Resistance Syndrome
disease
resistance to thyroid hormone
7068
THRB
thyroid hormone receptor beta
CTD_human
10,660,344
T426I a new mutation in the thyroid hormone receptor beta gene in a sporadic patient with resistance to thyroid hormone and dysmorphism. Mutations in brief no. 192. Online.
0.639112
T426I a new mutation in the <span class="gene" id="10660344-0-28-57">thyroid hormone receptor beta</span> gene in a sporadic patient with <span class="disease" id="10660344-0-90-119">resistance to thyroid hormone</span> and dysmorphism. Mutations in brief no. 192. Online.
CTD_human;HPO;ORPHANET
25
0
Biomarker
C0004153
Atherosclerosis
disease
atherosclerosis
348
APOE
apolipoprotein E
CTD_human
11,231,916
Troglitazone inhibits atherosclerosis in apolipoprotein E-knockout mice: pleiotropic effects on CD36 expression and HDL.
0.587329
Troglitazone inhibits <span class="disease" id="11231916-0-22-37">atherosclerosis</span> in <span class="gene" id="11231916-0-41-57">apolipoprotein E</span>-knockout mice: pleiotropic effects on CD36 expression and HDL.
CTD_human;HPO
null
null
Negative
MESH:C536528
null
null
LPS
16153
null
IL-10
null
28,198,981
Objective: This study is to determine the effects of P. gingivalis LPS and CpG on B10 cell expansion and IL-10 competency in vitro.
null
null
null
null
null
Negative
MESH:D003327
null
null
coronary heart disease
20410
null
vinexin
null
28,209,562
METHODS AND RESULTS: Immunoblot analysis showed that vinexin b expression is upregulated in the atherosclerotic lesions of both patients with coronary heart disease and hyperlipemic apolipoprotein E-deficient mice and is primarily localized in macrophages indicated by immunofluorescence staining.
null
null
null
6
0
Biomarker
C0027697
Nephritis
disease
nephritis
213
ALB
serum albumin
CTD_human
2,945,356
The distribution of heparan sulfate proteoglycan (HS-PG) was examined electron microscopically by the high iron diamine (HID) method in puromycin aminonucleoside (PAN) nephrosis, accelerated Masugi nephritis (NTN), and serum sickness nephritis induced by bovine serum albumin (BSA nephritis) in the rat.
0.2
The distribution of heparan sulfate proteoglycan (HS-PG) was examined electron microscopically by the high iron diamine (HID) method in puromycin aminonucleoside (PAN) nephrosis, accelerated Masugi nephritis (NTN), and serum sickness <span class="disease" id="2945356-1-234-243">nephritis</span> induced by bovine <span class="gene" id="2945356-1-262-275">serum albumin</span> (BSA <span class="disease" id="2945356-1-281-290">nephritis</span>) in the rat.
CTD_human
1
0
Biomarker
C0079744
Diffuse Large B-Cell Lymphoma
disease
DLBCL
2735
GLI1
GLI1
CTD_human
21,625,222
Furthermore, in DLBCL tumor samples, significantly high ABCG2 and GLI1 levels were found in DLBCL tumors with lymph node involvement in comparison with DLBCL tumor cells collected from pleural and/or peritoneal effusions.
0.201099
Furthermore, in <span class="disease" id="21625222-6-16-21">DLBCL</span> tumor samples, significantly high ABCG2 and <span class="gene" id="21625222-6-66-70">GLI1</span> levels were found in <span class="disease" id="21625222-6-92-97">DLBCL</span> tumors with lymph node involvement in comparison with <span class="disease" id="21625222-6-152-157">DLBCL</span> tumor cells collected from pleural and/or peritoneal effusions.
CTD_human
1
0
Biomarker
C0026896
Myasthenia Gravis
disease
MG
355
FAS
Fas
CTD_human
15,169,653
Abnormalities of apoptosis and Fas gene expression of MG patients' thymocytes, and Fas gene mutation may be related to the pathogenesis and progression of MG.
0.2
Abnormalities of apoptosis and <span class="gene" id="15169653-11-31-34">Fas</span> gene expression of <span class="disease" id="15169653-11-54-56">MG</span> patients' thymocytes, and <span class="gene" id="15169653-11-83-86">Fas</span> gene mutation may be related to the pathogenesis and progression of <span class="disease" id="15169653-11-155-157">MG</span>.
CTD_human
null
null
Negative
MESH:D065632
null
null
CHIKV
5601
null
MAPK9
null
28,105,853
The analysis identified seven host proteins (CCDC130, CPNE6, POLR2C, MAPK9, EIF4A2, EEF1A1 and EIF3I) as putative interactors of CHIKV nsP2 which were selected for further analysis based on their roles in host cellular machinery.
null
null
null
2
0
Biomarker
C1136249
Mental Retardation, X-Linked
disease
X-linked mental retardation
10084
PQBP1
PQBP1
CTD_human
15,024,694
Novel truncating mutations in the polyglutamine tract binding protein 1 gene (PQBP1) cause Renpenning syndrome and X-linked mental retardation in another family with microcephaly.
0.211495
Novel truncating mutations in the <span class="gene" id="15024694-0-34-71">polyglutamine tract binding protein 1</span> gene (<span class="gene" id="15024694-0-78-83">PQBP1</span>) cause Renpenning syndrome and <span class="disease" id="15024694-0-115-142">X-linked mental retardation</span> in another family with microcephaly.
CTD_human
64
0
Therapeutic
C0002871
Anemia
disease
anemia
2056
EPO
erythropoietin
CTD_human
10,506,726
Erythropoietin reduces anemia and transfusions: A randomized trial with or without erythropoietin during chemotherapy.
0.24092
<span class="gene" id="10506726-0-0-14">Erythropoietin</span> reduces <span class="disease" id="10506726-0-23-29">anemia</span> and transfusions: A randomized trial with or without <span class="gene" id="10506726-0-83-97">erythropoietin</span> during chemotherapy.
CTD_human
null
null
Negative
MESH:D006192
null
null
H. parasuis
16189
null
IL-4
null
28,187,951
Our results showed that the microspheres with Omp16 induced significant higher H. parasuis-specific antibodies, and higher titers of IL-2, IL-4, and IFN-y than those by Omp16-FIA in treated mice (p<0.05).
null
null
null
null
null
Negative
MESH:D009369
null
null
tumor
23802
null
AMFR
null
28,191,869
We show that enzalutamide treatment in human models of prostate cancer and patient tissues is accompanied by a ubiquitin E3-ligase, AMFR, mediating loss of 11b-hydroxysteroid dehydrogenase-2 (11b-HSD2), which otherwise inactivates cortisol, sustaining tumor cortisol concentrations to stimulate GR and enzalutamide resistance.
null
null
null
null
null
Negative
MESH:D001943
null
null
breast cancer
16001
null
IGF1R
null
28,017,727
Gene microarray analysis revealed that silencing HS6ST3 significantly changed the expression of IGF1R and XAF1 in breast cancer cells.
null
null
null
null
null
Negative
MESH:D019217
null
null
attrition
17395
null
MMP-9
null
28,191,506
Currently, we attempt to find that in MMP-9 knock out (KO) mice displayed severe attrition on teeth development.
null
null
null
1
0
Biomarker
C1510586
Autism Spectrum Disorders
disease
autism spectrum disorders
10743
RAI1
RAI1
CTD_human
20,981,775
The mechanisms by which the deletion of RAI1 and contiguous genes cause psychopathology remain unknown but they provide a solid starting point for further studies of gene-brain-behavior interactions in SMS and autism spectrum disorders.
0.200824
The mechanisms by which the deletion of <span class="gene" id="20981775-10-40-44">RAI1</span> and contiguous genes cause psychopathology remain unknown but they provide a solid starting point for further studies of gene-brain-behavior interactions in SMS and <span class="disease" id="20981775-10-210-235">autism spectrum disorders</span>.
CTD_human
null
null
Negative
MESH:D007239
null
null
C infection
155030
null
Gag
null
28,077,659
Here, we employed MHC class II tetramers designed to immunodominant Gag epitopes and used them to characterize CD4<sup>+</sup>T cell responses in HIV-1 clade C infection.
null
null
null
null
null
Negative
MESH:D009136
null
null
muscular dystrophy
10585
null
POMT1
null
28,116,189
Mutations in a number of genes including POMT1, POMT2, POMGNT1, POMGNT2, FKTN, FKRP, LARGE, and ISPD are known to cause alpha dystroglycan-related muscular dystrophy.
null
null
null