NofPmids
float64
1
96
NofSnps
float64
0
1.07k
associationType
stringclasses
3 values
diseaseId
stringlengths
8
12
diseaseName
stringclasses
587 values
diseaseType
stringclasses
3 values
disease_mention
stringlengths
1
89
geneId
stringlengths
1
30
geneSymbol
stringlengths
2
10
gene_mention
stringlengths
2
69
originalSource
stringclasses
1 value
pmid
int64
104k
28.2M
raw_sentence
stringlengths
39
1.09k
score
float64
0.2
1
sentence
stringlengths
143
948
source
stringclasses
9 values
1
0
Biomarker
C0004352
Autistic Disorder
disease
autism
221035
REEP3
REEP3
CTD_human
17,290,275
Identification and characterization of the TRIP8 and REEP3 genes on chromosome 10q21.3 as novel candidate genes for autism.
0.203008
Identification and characterization of the TRIP8 and <span class="gene" id="17290275-0-53-58">REEP3</span> genes on chromosome 10q21.3 as novel candidate genes for <span class="disease" id="17290275-0-116-122">autism</span>.
CTD_human
null
null
Negative
MESH:D000386
null
null
ARC
29191
null
neurokinin B
null
28,009,489
Neurones expressing kisspeptin, neurokinin B and dynorphin A, located in the arcuate nucleus of the hypothalamus (ARC), are important regulators of reproduction.
null
null
null
null
null
Negative
MESH:D007079
null
null
ileitis
170750
null
SAMP
null
28,125,562
Recently, we determined that the genetic deletion of the NOD2 gene decreased the severity of Th2-mediated chronic inflammation in a mouse strain characterized by suffering CD-like spontaneous progressive ileitis (SAMP1Yit/Fc; SAMP).
null
null
null
null
null
Negative
MESH:D005316
null
null
distress
2234
null
Feb 2
null
28,022,557
METHODS: From Feb 2 to Apr 7, 2007, office patients were asked to rate their distress objectively using the validated distress scale developed by the National Comprehensive Cancer Network (NCCN).
null
null
null
null
null
Negative
MESH:D009410
null
null
neuronal loss
15235
null
Mst1
null
28,210,902
In conclusion, the present study demonstrated that deletion of Mst1 attenuated neuronal loss and improved locomotor function in a mouse model of SCI, via preserving mitochondrial function, attenuating mitochondria-mediated apoptotic pathway, and suppressing inflammation, at least in part.
null
null
null
null
null
Negative
MESH:D062787
null
null
overdose
26413
null
extracellular signal-regulated kinase
null
28,081,632
Significantly, BA treatment can also decrease hepatic phosphorylated extracellular signal-regulated kinase (ERK) expression, which is induced by APAP overdose.
null
null
null
null
null
Negative
MESH:D004679
null
null
encephalomyelitis
17441
null
MOG
null
28,147,248
We studied whether prolonged electrical microstimulation of a hindbrain region (the nucleus raphe magnus) can attenuate experimental autoimmune encephalomyelitis, a murine model of MS induced by MOG<sub>35-55</sub>injection.
null
null
null
null
null
Negative
MESH:D012893
null
null
SE
5673
null
PSG
null
28,199,710
There was no statistically significant effect for PSG SE (p = .07).
null
null
null
null
null
Negative
MESH:D001943
null
null
breast cancers
18708
null
PI3K
null
28,003,307
Purpose: Metastatic breast cancers continue to elude current therapeutic strategies, including those utilizing PI3K inhibitors.
null
null
null
2
0
Biomarker
C3714756
Intellectual Disability
group
intellectual disability
284058
KANSL1
KANSL1
CTD_human
22,544,363
We show that haploinsufficiency of KANSL1 is sufficient to cause the 17q21.31 microdeletion syndrome, a multisystem disorder characterized by intellectual disability, hypotonia and distinctive facial features.
0.200824
We show that haploinsufficiency of <span class="gene" id="22544363-1-35-41">KANSL1</span> is sufficient to cause the 17q21.31 microdeletion syndrome, a multisystem disorder characterized by <span class="disease" id="22544363-1-142-165">intellectual disability</span>, hypotonia and distinctive facial features.
CTD_human
null
null
Negative
MESH:D015838
null
null
SC
3479;3481
null
IGF-I and -II
null
28,089,088
We conclude that the IGF/IGFBP system seems to contribute to the pathogenesis of SC, especially IGF-I and -II, and their effects enhancing binding protein 5.
null
null
null
null
null
Negative
MESH:D007249
null
null
intestinal inflammation
16176
null
IL-1b
null
28,025,954
Oral administration of the microalgal biomass reduced TNBS-induced intestinal inflammation, evidenced by an inhibition of body weight loss, an improvement in colon morphology and a decrease in pro-inflammatory cytokines TNF-a, IL-1b, IL-6 and IL-17.
null
null
null
2
0
Biomarker
C0002888
Anemia, Megaloblastic
disease
megaloblastic anemia
1719
DHFR
DHFR
CTD_human
21,310,277
Dihydrofolate reductase deficiency due to a homozygous DHFR mutation causes megaloblastic anemia and cerebral folate deficiency leading to severe neurologic disease.
0.400275
Dihydrofolate reductase deficiency due to a homozygous <span class="gene" id="21310277-0-55-59">DHFR</span> mutation causes <span class="disease" id="21310277-0-76-96">megaloblastic anemia</span> and cerebral folate deficiency leading to severe neurologic disease.
CTD_human;HPO
null
null
Negative
MESH:D009422
null
null
photothrombotic MCA damage
13051
null
Cx3CR1
null
28,003,156
Two groups of heterozygote Cx3CR1-GFP reporter mice (to follow microglia) were subject to stroke injury either with coagulator-mediated occlusion or photothrombotic MCA damage.
null
null
null
null
null
Negative
MESH:D006623
null
null
VHL
201161
null
p30
null
28,143,252
VHL p30 band intensities varied as a function of compound used, suggesting alternate post-translational processing.
null
null
null
null
null
Negative
MESH:D020209
null
null
spared nerve injury
12064
null
BDNF
null
28,111,162
This study examines the role of BDNF in the spared nerve injury (SNI) mice model.
null
null
null
null
null
Negative
MESH:D030342
null
null
inherited lysosomal storage disorder
16534
null
KCa3.1
null
28,197,106
Recent studies suggest modulation of KCa3.1 by omega-3 fatty acids as negative modulators and impaired KCa3.1 functions in the inherited lysosomal storage disorder (LSD), Fabry disease (FD).
null
null
null
null
null
Negative
MESH:D010015
null
null
LD disappearance
57111
null
Rab25
null
28,038,427
Down-regulation of Rab25 activity, using Rab25 siRNA, blocked the target recognition of autophagy on LDs, and inhibited LD disappearance of quiescent HSCs.
null
null
null
4
0
Therapeutic
C0020429
Hyperalgesia
phenotype
hyperalgesia
796
CALCA
calcitonin
CTD_human
12,855,330
The role of calcitonin gene-related peptide (CGRP) in the generation and maintenance of mechanical allodynia and hyperalgesia in rats after intradermal injection of capsaicin.
0.280275
The role of <span class="gene" id="12855330-0-12-22">calcitonin</span> gene-related peptide (CGRP) in the generation and maintenance of mechanical allodynia and <span class="disease" id="12855330-0-113-125">hyperalgesia</span> in rats after intradermal injection of capsaicin.
CTD_human
null
null
Negative
MESH:D009135
null
null
myopathies
2489
null
FSHD
null
28,040,729
FacioScapuloHumeral Muscular Dystrophy (FSHD), one of the most common myopathies, is characterized by a complex interplay of genetic and epigenetic events.
null
null
null
1
0
Biomarker
C0027627
Neoplasm Metastasis
phenotype
metastasis
3688
ITGB1
integrin ?1
CTD_human
23,562,787
Shikonin attenuates lung cancer cell adhesion to extracellular matrix and metastasis by inhibiting integrin ?1 expression and the ERK1/2 signaling pathway.
0.21232
Shikonin attenuates lung cancer cell adhesion to extracellular matrix and <span class="disease" id="23562787-0-74-84">metastasis</span> by inhibiting <span class="gene" id="23562787-0-99-110">integrin &beta;1</span> expression and the ERK1/2 signaling pathway.
CTD_human
null
null
Negative
MESH:D007249
null
null
inflammatory cell infiltration
18383
null
osteoprotegerin
null
28,062,506
Decreased inflammatory cell infiltration and a reduction in the expression of wingless-type mouse mammary virus integration site/b-catenin responsive genes, including matrix metalloproteinase-9, osteoprotegerin, and osteopontin, were observed in the aortas of SOST(Tg) .ApoE(-/-) mice.
null
null
null
null
null
Negative
MESH:D020159
null
null
TS
1956
null
EGFR
null
28,023,232
Levels of TTF1, TS, folate receptor (FR), FPGS, estrogen receptor (ER), RRM1, EGFR and PTEN were assessed using immunohistochemistry assays from Ventana Medical Systems.
null
null
null
null
null
Negative
MESH:D002181
null
null
VVC
54681
null
pH 4
null
28,158,577
Objectives: To evaluate the antifungal activity of CD101 against clinical VVC isolates of Candida spp., including azole-resistant strains, at pH 4.
null
null
null
null
null
Negative
MESH:D009369
null
null
lipomatous tumor
17246
null
murine double minute 2
null
28,155,209
We therefore wished to begin to explore this idea by evaluating atypical lipomatous tumor/well-differentiated liposarcoma (ALT/WDL) cells, because murine double minute 2 (MDM2) gene amplification, which leads to p53 hypofunction, is found in almost all ALT/WDLs.
null
null
null
null
null
Negative
MESH:C536962
null
null
TS
5156
null
PDGFRA
null
28,147,793
Biomarker expression differences that did not meet statistical significance: ERCC1, MGMT, PDGFRA, RRM1, SPARC, TS and TOPO1.
null
null
null
null
null
Negative
MESH:D064420
null
null
toxicities
3344628
null
CG0070
null
28,143,293
CONCLUSIONS: CG0070 was well tolerated with minimal local and systemic toxicities.
null
null
null
1
0
Biomarker
C0023487
Acute Promyelocytic Leukemia
disease
AML-M3
3687
ITGAX
CD11c
CTD_human
16,764,927
We demonstrate the clinical usefulness of a panel of beta2 integrins (CD11a, CD11b and CD11c) in accurate prediction of AML-M3, and recommend inclusion of this immunophenotypic analysis to identify patients who require ATRA therapy.
0.200549
We demonstrate the clinical usefulness of a panel of beta2 integrins (CD11a, CD11b and <span class="gene" id="16764927-8-87-92">CD11c</span>) in accurate prediction of <span class="disease" id="16764927-8-120-126">AML-M3</span>, and recommend inclusion of this immunophenotypic analysis to identify patients who require ATRA therapy.
CTD_human
null
null
Negative
MESH:D001943
null
null
breast cancer
12775
null
CCR7
null
28,137,279
We recently reported that the chemokine receptor CCR7, a multi-functional regulator of breast cancer, maintains the stem-like cell population.
null
null
null
20
0
Biomarker
C0037769
West Syndrome
disease
infantile spasms
5443
POMC
Adrenocorticotropic hormone
CTD_human
8,980,841
Adrenocorticotropic hormone and vigabatrin treatment of children with infantile spasms underlying cerebral palsy.
0.203022
<span class="gene" id="8980841-0-0-27">Adrenocorticotropic hormone</span> and vigabatrin treatment of children with <span class="disease" id="8980841-0-70-86">infantile spasms</span> underlying cerebral palsy.
CTD_human
null
null
Negative
MESH:D020521
null
null
stroke
231004
null
mRS
null
28,028,149
Outcome was assessed by the 7-point modified Rankin Scale (mRS) measured at 90 days after ischemic stroke.
null
null
null
null
null
Negative
MESH:D003643
null
null
death
24494
null
interleukin-1b
null
28,054,940
The activation of microglia may promote the neurodegenerative process through the release of proinflammatory cytokines, such as interleukin-1b (IL-1b) and tumor necrosis factor-a (TNFa), which may lead to neuronal damage and eventual death.
null
null
null
null
null
Negative
MESH:D020244
null
null
MCAO
81736
null
NF-kB
null
28,087,909
Meanwhile triptolide also dramatically reduced the number of GFAP-positive astrocytes (P<0.05), alleviated protein expression of COX-2 (91.67 1.31), iNOS (95.24 5.07) and NF-kB (75.03 2.06) triggered by MCAO (all P<0.05), and induced a down-regulation of cell apoptosis as showed by TUNEL assay (64.15 3.52, P<0.05).
null
null
null
1
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
Grawitz tumor
5443
POMC
ACTH
CTD_human
2,844,640
We authors believe that this is the first documented case of ACTH-producing Grawitz tumor in the literature.
0.200275
We authors believe that this is the first documented case of <span class="gene" id="2844640-9-61-65">ACTH</span>-producing <span class="disease" id="2844640-9-76-89">Grawitz tumor</span> in the literature.
CTD_human
17
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
5972
REN
renin
CTD_human
12,600,921
Endothelin-1 increases vascular superoxide via endothelin(A)-NADPH oxidase pathway in low-renin hypertension.
0.363794
Endothelin-1 increases vascular superoxide via endothelin(A)-NADPH oxidase pathway in low-<span class="gene" id="12600921-0-90-95">renin</span> <span class="disease" id="12600921-0-96-108">hypertension</span>.
CTD_human
68
0
Biomarker
C0020538
Hypertensive disease
group
hypertension
5443
POMC
ACTH
CTD_human
16,546,835
N-acetylcysteine antagonizes the development but does not reverse ACTH-induced hypertension in the rat.
0.203846
N-acetylcysteine antagonizes the development but does not reverse <span class="gene" id="16546835-0-66-70">ACTH</span>-induced <span class="disease" id="16546835-0-79-91">hypertension</span> in the rat.
CTD_human
1
0
Therapeutic
C0007682
CNS disorder
group
CNS disorders
2056
EPO
erythropoietin
CTD_human
15,816,862
Astroglial cytoprotection by erythropoietin pre-conditioning: implications for ischemic and degenerative CNS disorders.
0.200275
Astroglial cytoprotection by <span class="gene" id="15816862-0-29-43">erythropoietin</span> pre-conditioning: implications for ischemic and degenerative <span class="disease" id="15816862-0-105-118">CNS disorders</span>.
CTD_human
1
0
Biomarker
C0007134
Renal Cell Carcinoma
disease
RCC
307
ANXA4
annexin IV
CTD_human
15,108,329
Overexpression of three proteins, alphabeta-crystallin, manganese superoxide dismutase (MnSOD), and annexin IV, most commonly observed in primary RCC cell cultures, were also observed by immunoblot analysis of proteins from the RCC tissues from which the primary cell cultures were derived.
0.203282
Overexpression of three proteins, alphabeta-crystallin, manganese superoxide dismutase (MnSOD), and <span class="gene" id="15108329-7-100-110">annexin IV</span>, most commonly observed in primary <span class="disease" id="15108329-7-146-149">RCC</span> cell cultures, were also observed by immunoblot analysis of proteins from the <span class="disease" id="15108329-7-228-231">RCC</span> tissues from which the primary cell cultures were derived.
CTD_human
2
0
Biomarker
C1263846
Attention deficit hyperactivity disorder
disease
attention-deficit/hyperactivity disorder
1816
DRD5
DRD5
CTD_human
14,732,906
Joint analysis of the DRD5 marker concludes association with attention-deficit/hyperactivity disorder confined to the predominantly inattentive and combined subtypes.
0.224201
Joint analysis of the <span class="gene" id="14732906-0-22-26">DRD5</span> marker concludes association with <span class="disease" id="14732906-0-61-101">attention-deficit/hyperactivity disorder</span> confined to the predominantly inattentive and combined subtypes.
CTD_human
11
4
Biomarker
C0023467
Leukemia, Myelocytic, Acute
disease
AML
2322
FLT3
FLT3
CTD_human
25,053,825
BET protein antagonist JQ1 is synergistically lethal with FLT3 tyrosine kinase inhibitor (TKI) and overcomes resistance to FLT3-TKI in AML cells expressing FLT-ITD.
0.52
BET protein antagonist JQ1 is synergistically lethal with <span class="gene" id="25053825-0-58-62">FLT3</span> tyrosine kinase inhibitor (TKI) and overcomes resistance to <span class="gene" id="25053825-0-123-127">FLT3</span>-TKI in <span class="disease" id="25053825-0-135-138">AML</span> cells expressing FLT-ITD.
CTD_human
2
17
Biomarker
C0004903
Beckwith-Wiedemann Syndrome
disease
Beckwith-Wiedemann syndrome
1028
CDKN1C
CDKN1C
CTD_human
22,634,751
All IMAGe-associated mutations clustered in the PCNA-binding domain of CDKN1C and resulted in loss of PCNA binding, distinguishing them from the mutations of CDKN1C that cause Beckwith-Wiedemann syndrome, an overgrowth syndrome.
0.427979
All IMAGe-associated mutations clustered in the PCNA-binding domain of <span class="gene" id="22634751-6-71-77">CDKN1C</span> and resulted in loss of PCNA binding, distinguishing them from the mutations of <span class="gene" id="22634751-6-158-164">CDKN1C</span> that cause <span class="disease" id="22634751-6-176-203">Beckwith-Wiedemann syndrome</span>, an overgrowth syndrome.
CTD_human;UNIPROT
null
null
Negative
MESH:D009410
null
null
neuronal damage
24494
null
interleukin-1b
null
28,054,940
The activation of microglia may promote the neurodegenerative process through the release of proinflammatory cytokines, such as interleukin-1b (IL-1b) and tumor necrosis factor-a (TNFa), which may lead to neuronal damage and eventual death.
null
null
null
null
null
Negative
MESH:D007239
null
null
multiplicity-of-infection
16153
null
IL-10
null
28,140,445
Interestingly, H37Rv, but not H37Ra, impaired DC surface molecule expression (CD80, CD86 and MHC class II) due to prominent interleukin-10 (IL-10) production while augmenting the expression of tolerogenic molecules including PD-L1, CD103, Tim-3 and indoleamine 2,3-dioxygenase on DCs in a multiplicity-of-infection (MOI) -dependent manner.
null
null
null
2
0
Biomarker
C0020557
Hypertriglyceridemia
phenotype
HTG
4023
LPL
LPL
CTD_human
20,657,596
Through GWAS, we identified common variants in APOA5, GCKR, LPL and APOB associated with HTG.
0.306491
Through GWAS, we identified common variants in APOA5, GCKR, <span class="gene" id="20657596-5-60-63">LPL</span> and APOB associated with <span class="disease" id="20657596-5-89-92">HTG</span>.
CTD_human
1
0
Biomarker
C0086543
Cataract
disease
cataract
1414
CRYBB1
CRYBB1
CTD_human
12,360,425
Sequencing failed to detect any nucleotide changes in CRYBA4; however, a G-->T transversion in exon 6 of CRYBB1 was found to cosegregate with cataract in the family.
0.408748
Sequencing failed to detect any nucleotide changes in CRYBA4; however, a G--&gt;T transversion in exon 6 of <span class="gene" id="12360425-4-105-111">CRYBB1</span> was found to cosegregate with <span class="disease" id="12360425-4-142-150">cataract</span> in the family.
CTD_human;HPO
null
null
Negative
MESH:D009187
null
null
myelitis
6818
null
STM
null
28,067,584
BACKGROUND: Some patients with neuromyelitis optica spectrum disorders (NMOSD) present with spinal cord lesions extending fewer than three vertebral segments (short transverse myelitis, STM), hindering an early diagnosis.
null
null
null
null
null
Negative
MESH:C536962
null
null
TS
7422
null
VEGF
null
28,022,460
The genes studied were Kras, PIK3CA, PTEN, ERCC1, ERCC2/XPD, p53, MLH1, MSH2, MGMT, XRCC1, VEGF, FCGR3A, ABCG2, ABCB1, GSTP1, CCND1, MTHFR, TS and DPD.
null
null
null
69
0
Therapeutic
C0020538
Hypertensive disease
group
hypertension
183
AGT
angiotensin II
CTD_human
7,323,490
Most of these effects of angiotensin II were opposite to the effects of hypertension caused by phenylephrine and aortic balloon inflation.
0.52
Most of these effects of <span class="gene" id="7323490-5-25-39">angiotensin II</span> were opposite to the effects of <span class="disease" id="7323490-5-72-84">hypertension</span> caused by phenylephrine and aortic balloon inflation.
CTD_human
1
2
Biomarker
C0242383
Age related macular degeneration
disease
age-related macular degeneration
717
C2
C2
CTD_human
16,518,403
Variation in factor B (BF) and complement component 2 (C2) genes is associated with age-related macular degeneration.
0.248308
Variation in factor B (BF) and complement component 2 (<span class="gene" id="16518403-0-55-57">C2</span>) genes is associated with <span class="disease" id="16518403-0-84-116">age-related macular degeneration</span>.
CTD_human
2
0
Biomarker
C1510586
Autism Spectrum Disorders
disease
Autism spectrum disorder
139411
PTCHD1
PTCHD1
CTD_human
20,844,286
Disruption at the PTCHD1 Locus on Xp22.11 in Autism spectrum disorder and intellectual disability.
0.201923
Disruption at the <span class="gene" id="20844286-0-18-24">PTCHD1</span> Locus on Xp22.11 in <span class="disease" id="20844286-0-45-69">Autism spectrum disorder</span> and intellectual disability.
CTD_human
3
0
Biomarker
C0021846
Intestinal Polyps
phenotype
intestinal polyps
324
APC
Apc
CTD_human
12,189,188
When Apc gene knockout mice (APC1309 mice) were given 600 or 1200 p.p.m. mofezolac in their diet for 8 weeks, the numbers of intestinal polyps were also dose-dependently decreased, with reduction to 59% of that in the control diet group at the higher dose.
0.205154
When <span class="gene" id="12189188-6-5-8">Apc</span> gene knockout mice (APC1309 mice) were given 600 or 1200 p.p.m. mofezolac in their diet for 8 weeks, the numbers of <span class="disease" id="12189188-6-125-142">intestinal polyps</span> were also dose-dependently decreased, with reduction to 59% of that in the control diet group at the higher dose.
CTD_human
null
null
Negative
MESH:C566610
null
null
longitudinal axis
1361
null
TAFI
null
28,135,035
Methods Immunohistochemistry in serial sections along the longitudinal axis of endarterectomies from patients with symptomatic carotid stenosis (n = 19) were studied using an antibody specific for free PAI-1 (I205), an antibody with high affinity for TAFI/TAFIa (CP17) and established antibodies for smooth muscle cells (a-actin), endothelial cells (von Willebrand factor [VWF]), macrophages (CD68) and platelets (CD42).
null
null
null
null
null
Negative
MESH:D009369
null
null
primary tumor
672;675
null
BRCA-1/2
null
28,022,858
Evaluate biomarkers in primary tumor that could predict response to PARPi such as BRCA-1/2, FANCD2 nuclear foci formation (using the FA Triple Stain Immunofluroscence test/FATSI) and expression of miR 155 (oncogenic miR that targets DNA repair genes).
null
null
null
null
null
Negative
MESH:D043183
null
null
BO
310738
null
nerve growth factor
null
28,079,757
We tested the hypothesis that mechanical stress in obstruction upregulates expression of nociception mediator nerve growth factor (NGF) in gut smooth muscle cells (SMCs), and NGF sensitizes primary sensory nerve to contribute to pain in BO.
null
null
null
96
174
Biomarker
C0019202
Hepatolenticular Degeneration
disease
Wilson's disease
540
ATP7B
ATP7B
CTD_human
22,455,587
These examples illustrate how impaired regulation of copper transport pathways can cause organ damage and provide important insights into the impact of defects in specific molecular processes, including those catalyzed by the copper-transporting ATPases, ATP7A (mutated in Menkes disease), ATP7B (Wilson's disease), and the copper chaperones such as those for cytochrome c oxidase, SCO1 and SCO2.
0.885769
These examples illustrate how impaired regulation of copper transport pathways can cause organ damage and provide important insights into the impact of defects in specific molecular processes, including those catalyzed by the copper-transporting ATPases, ATP7A (mutated in Menkes disease), <span class="gene" id="22455587-6-290-295">ATP7B</span> (<span class="disease" id="22455587-6-297-313">Wilson's disease</span>), and the copper chaperones such as those for cytochrome c oxidase, SCO1 and SCO2.
CTD_human;ORPHANET;UNIPROT
2
0
Biomarker
C0028754
Obesity
disease
obese
6648
SOD2
MnSOD
CTD_human
23,956,348
Electron transport complex-II and manganese superoxide dismutase (MnSOD) enzyme activities were decreased in obese-NGT and obese-GDM, compared with NW women.
0.203781
Electron transport complex-II and manganese superoxide dismutase (<span class="gene" id="23956348-5-66-71">MnSOD</span>) enzyme activities were decreased in <span class="disease" id="23956348-5-109-114">obese</span>-NGT and <span class="disease" id="23956348-5-123-128">obese</span>-GDM, compared with NW women.
CTD_human
null
null
Negative
MESH:D064420
null
null
toxicity
11835
null
AR
null
28,003,546
We report that cyclin-dependent kinase 2 (CDK2) phosphorylates polyQ-AR specifically at Ser<sup>96</sup>Phosphorylation of polyQ-AR by CDK2 increased protein stabilization and toxicity and is negatively regulated by the adenylyl cyclase (AC)/protein kinase A (PKA) signaling pathway.
null
null
null
2
0
Biomarker
C0024117
Chronic Obstructive Airway Disease
disease
COPD
5265
SERPINA1
AAT
CTD_human
25,579,632
Lung AAT amount is inversely correlated with chronic obstructive pulmonary disease (COPD), a serious and often deadly condition, with increasing frequency in the aging population.
0.462609
Lung <span class="gene" id="25579632-3-5-8">AAT</span> amount is inversely correlated with <span class="disease" id="25579632-3-45-82">chronic obstructive pulmonary disease</span> (<span class="disease" id="25579632-3-84-88">COPD</span>), a serious and often deadly condition, with increasing frequency in the aging population.
CTD_human;HPO
null
null
Negative
MESH:D035583
null
null
RSS
24385
null
glucokinase
null
28,209,058
We investigated whether long-term administration of RSS maintains glucose tolerance and whether the underlying mechanism involves hepatic glucokinase translocation.
null
null
null
1
0
Biomarker
C0007137
Squamous cell carcinoma
disease
SCC
5478
PPIA
cyclophilin A
CTD_human
15,274,141
At least, SCC antigen, G protein, glutathione S-transferase, manganese superoxide dismutase, annexins, voltage-dependent anion channel, cyclophilin A, stratifin and galectin 7 are candidates for targeted proteins.
0.2
At least, <span class="disease" id="15274141-8-10-13">SCC</span> antigen, G protein, glutathione S-transferase, manganese superoxide dismutase, annexins, voltage-dependent anion channel, <span class="gene" id="15274141-8-136-149">cyclophilin A</span>, stratifin and galectin 7 are candidates for targeted proteins.
CTD_human
null
null
Negative
MESH:D005355
null
null
fibrosis
21803
null
TGF-b
null
28,057,611
Previous studies pointed to a connection between WNT-5A and the fibrogenic factor TGF-b warranting further studies into the functional role of WNT-5A in liver fibrosis.
null
null
null
null
null
Negative
MESH:D011475
null
null
overall survival
1956
null
EGFR
null
28,020,853
They were evaluated for clinicopathological features, EGFR, k-ras and b-raf mutations, erlotinib treatment, time to progression (TTP) and overall survival (OS).
null
null
null
1
0
Biomarker
C1168401
Squamous cell carcinoma of the head and neck
disease
HNSCC
5290
PIK3CA
PI3K
CTD_human
23,873,848
Although consistent inhibition of the PI3K pathway was not evident in HNSCC, we identified a combination of PI3K/TP53 events necessary, but not sufficient, for rigosertib sensitivity.
0.210989
Although consistent inhibition of the <span class="gene" id="23873848-10-38-42">PI3K</span> pathway was not evident in <span class="disease" id="23873848-10-70-75">HNSCC</span>, we identified a combination of <span class="gene" id="23873848-10-108-112">PI3K</span>/TP53 events necessary, but not sufficient, for rigosertib sensitivity.
CTD_human
20
0
Biomarker
C0037769
West Syndrome
disease
infantile spasms
5443
POMC
adrenocorticotropic hormone
CTD_human
1,656,808
The seizures occurred following the suppression of infantile spasms with adrenocorticotropic hormone therapy and disappeared following the cessation of clonazepam administration.
0.203022
The seizures occurred following the suppression of <span class="disease" id="1656808-2-51-67">infantile spasms</span> with <span class="gene" id="1656808-2-73-100">adrenocorticotropic hormone</span> therapy and disappeared following the cessation of clonazepam administration.
CTD_human
null
null
Negative
MESH:D011471
null
null
prostate cancer
18548
null
PC3
null
28,134,352
In this study, we used n-butyl alcohol extract of Litchi seed (NLS) to treat prostate cancer PC3, DU145, RM1 and C4-2B cells.
null
null
null
1
0
Biomarker
C0023269
leiomyosarcoma
disease
leiomyosarcomas
5743
PTGS2
COX-2
CTD_human
18,645,019
Similarly, we found that HMGA1a and COX-2 are overexpressed in human leiomyosarcomas, a highly malignant uterine cancer.
0.200275
Similarly, we found that HMGA1a and <span class="gene" id="18645019-5-36-41">COX-2</span> are overexpressed in human <span class="disease" id="18645019-5-69-84">leiomyosarcomas</span>, a highly malignant uterine cancer.
CTD_human
35
84
Biomarker
C0022716
Menkes Kinky Hair Syndrome
disease
Menkes disease
538
ATP7A
ATP7A
CTD_human
25,247,420
Here, we analyzed changes in the systemic iron metabolism using an animal model of Menkes disease: copper-deficient mosaic mutant mice with dysfunction of the ATP7A copper transporter.
0.727934
Here, we analyzed changes in the systemic iron metabolism using an animal model of <span class="disease" id="25247420-4-83-97">Menkes disease</span>: copper-deficient mosaic mutant mice with dysfunction of the <span class="gene" id="25247420-4-159-164">ATP7A</span> copper transporter.
CTD_human;ORPHANET;UNIPROT
1
0
Therapeutic
C0003123
Anorexia
disease
anorexia
3557
IL1RN
IL-1RA
CTD_human
25,392,278
While, the type 1 IL-1 receptor (IL-1R1) antagonist IL-1RA dose-dependently attenuated both IL-1?- and DON-induced anorexia.
0.28
While, the type 1 IL-1 receptor (IL-1R1) antagonist <span class="gene" id="25392278-8-52-58">IL-1RA</span> dose-dependently attenuated both IL-1&beta;- and DON-induced <span class="disease" id="25392278-8-115-123">anorexia</span>.
CTD_human
1
0
Therapeutic
C0028840
Ocular Hypertension
disease
ocular hypertension
4312
MMP1
MMP1
CTD_human
20,089,869
Treatment of sheep steroid-induced ocular hypertension with a glucocorticoid-inducible MMP1 gene therapy virus.
0.2
Treatment of sheep steroid-induced <span class="disease" id="20089869-0-35-54">ocular hypertension</span> with a glucocorticoid-inducible <span class="gene" id="20089869-0-87-91">MMP1</span> gene therapy virus.
CTD_human
null
null
Negative
MESH:D001847
null
null
bone health
71660
null
chemerin
null
28,029,186
Considering that the association between metabolic syndrome and bone health remains unclear, the present study aimed to clarify the role of chemerin in the pathophysiology of bone loss induced by dyslipidemia, particularly modulating osteoclastogenesis.
null
null
null
2
0
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes
3636
INPPL1
SHIP2
CTD_human
12,086,927
The gene INPPL1, encoding the lipid phosphatase SHIP2, is a candidate for type 2 diabetes in rat and man.
0.202198
The gene <span class="gene" id="12086927-0-9-15">INPPL1</span>, encoding the lipid phosphatase <span class="gene" id="12086927-0-48-53">SHIP2</span>, is a candidate for <span class="disease" id="12086927-0-74-89">type 2 diabetes</span> in rat and man.
CTD_human
20
0
Biomarker
C0037769
West Syndrome
disease
infantile spasms
5443
POMC
ACTH
CTD_human
6,259,007
In spite of conflicting views as to the long-term effects of ACTH, prompt treatment seems to be mandatory, at least in cryptogenic cases of infantile spasms.
0.203022
In spite of conflicting views as to the long-term effects of <span class="gene" id="6259007-11-61-65">ACTH</span>, prompt treatment seems to be mandatory, at least in cryptogenic cases of <span class="disease" id="6259007-11-140-156">infantile spasms</span>.
CTD_human
null
null
Negative
MESH:D040181
null
null
X-linked intellectual disability syndromes
10084
null
polyglutamine-binding protein 1
null
28,073,926
Renpenning syndrome is a group of X-linked intellectual disability syndromes caused by mutations in human polyglutamine-binding protein 1 (PQBP1) gene.
null
null
null
null
null
Negative
MESH:D004342
null
null
hypersensitivity
16176
null
IL-1b
null
28,054,242
We observed that SFN dose-dependently attenuated CCI-induced pain behavioral hypersensitivity, accompanied by reduction in pro-inflammatory cytokines (TNF-a, IL-1b, IL-6) and upregulation of an anti-inflammatory cytokine (IL-10).
null
null
null
59
0
Therapeutic
C0038454
Cerebrovascular accident
group
stroke
5327
PLAT
alteplase
CTD_human
8,598,594
The higher rate of stroke in women after treatment with alteplase (2.0% vs 1.9% with streptokinase and intravenous heparin) was offset by a greater relative reduction in mortality (10.3% vs 11.1%).
0.221398
The higher rate of <span class="disease" id="8598594-13-19-25">stroke</span> in women after treatment with <span class="gene" id="8598594-13-56-65">alteplase</span> (2.0% vs 1.9% with streptokinase and intravenous heparin) was offset by a greater relative reduction in mortality (10.3% vs 11.1%).
CTD_human
1
0
Biomarker
C0039239
Sinus Tachycardia
disease
sinus tachycardia
1543
CYP1A1
CYP1A1
CTD_human
26,988,683
CYP1A1 mRNA expression level was significantly higher in residents with sinus tachycardia or bradycardia than in residents with normal heart rate (1.47×10(-3)(0.87×10(-3), 2.77×10(-3)) vs.1.24×10(-3)(0.64×10(-3), 2.31×10(-3)), P<0.05).
0.2
<span class="gene" id="26988683-8-0-6">CYP1A1</span> mRNA expression level was significantly higher in residents with <span class="disease" id="26988683-8-72-89">sinus tachycardia</span> or bradycardia than in residents with normal heart rate (1.47&times;10(-3)(0.87&times;10(-3), 2.77&times;10(-3)) vs.1.24&times;10(-3)(0.64&times;10(-3), 2.31&times;10(-3)), P&lt;0.05).
CTD_human
null
null
Negative
MESH:D003643
null
null
death
625249
null
GPx4
null
28,203,523
Cytotoxicity measured through LDH activity, lipid peroxidation immunostained for 4-hydroxynonenal, cell viability, and cell death were compared between cells transfected with either GPx4 siRNA or scrambled control siRNA.
null
null
null
1
0
Biomarker
C1961102
Precursor Cell Lymphoblastic Leukemia Lymphoma
disease
acute lymphoblastic leukemia
64109
CRLF2
CRLF2
CTD_human
19,838,194
Rearrangement of CRLF2 in B-progenitor- and Down syndrome-associated acute lymphoblastic leukemia.
0.20467
Rearrangement of <span class="gene" id="19838194-0-17-22">CRLF2</span> in B-progenitor- and Down syndrome-associated <span class="disease" id="19838194-0-69-97">acute lymphoblastic leukemia</span>.
CTD_human
null
null
Negative
MESH:C537475
null
null
multicatalytic endopeptidase complex-like 1
16913
null
LMP7
null
28,157,553
To study the effect of immunoproteasomes on LPS- or TNF-a-induced NF-kB activation, we used IFN-y stimulated peritoneal macrophages and mouse embryonic fibroblasts derived from mice deficient for the immunoproteasome subunits low molecular mass polypeptide (LMP) 2, or LMP7 and multicatalytic endopeptidase complex-like 1 (MECL-1).
null
null
null
null
null
Negative
MESH:C564276
null
null
TCP
6554
null
NTCP
null
28,048,236
We defined a theoretical framework to correlate these genes with radiotherapy outcomes as TCP and NTCP biological dose tools.
null
null
null
1
0
Biomarker
C0007370
Catalepsy
disease
catalepsy
2641
GCG
glucagon
CTD_human
9,798,264
Moreover, glucagon inhibited the locomotor and exploratory activity as well as the amphetamine-induced hyperactivity and enhanced haloperidol-induced catalepsy.
0.2
Moreover, <span class="gene" id="9798264-11-10-18">glucagon</span> inhibited the locomotor and exploratory activity as well as the amphetamine-induced hyperactivity and enhanced haloperidol-induced <span class="disease" id="9798264-11-150-159">catalepsy</span>.
CTD_human
null
null
Negative
MESH:D005355
null
null
tubulointerstitial fibrosis
17246
null
MDM2
null
28,100,501
Here we investigated the role of MDM2 in tubulointerstitial fibrosis (TIF).
null
null
null
51
124
Biomarker
C1142166
Brugada Syndrome (disorder)
disease
Brugada syndrome
6331
SCN5A
SCN5A
CTD_human
20,174,578
Loss-of-function mutations in SCN5A, the gene encoding Na(v)1.5 Na+ channel, are associated with inherited cardiac conduction defects and Brugada syndrome, which both exhibit variable phenotypic penetrance of conduction defects.
0.843536
Loss-of-function mutations in <span class="gene" id="20174578-1-30-35">SCN5A</span>, the gene encoding Na(v)1.5 Na+ channel, are associated with inherited cardiac conduction defects and <span class="disease" id="20174578-1-138-154">Brugada syndrome</span>, which both exhibit variable phenotypic penetrance of conduction defects.
CTD_human;ORPHANET;UNIPROT
1
0
Biomarker
C0011860
Diabetes Mellitus, Non-Insulin-Dependent
disease
type 2 diabetes mellitus risk
2944
GSTM1
GSTM1
CTD_human
22,652,274
The role of GSTM1, GSTT1, GSTP1, and OGG1 polymorphisms in type 2 diabetes mellitus risk: a case-control study in a Turkish population.
0.224201
The role of <span class="gene" id="22652274-0-12-17">GSTM1</span>, GSTT1, GSTP1, and OGG1 polymorphisms in <span class="disease" id="22652274-0-59-88">type 2 diabetes mellitus risk</span>: a case-control study in a Turkish population.
CTD_human
3
0
Biomarker
C0036572
Seizures
phenotype
seizure
6750
SST
somatostatin
CTD_human
7,913,897
[Effect of intracerebral injections of somatostatin and neurotensin on motor functions in seizure].
0.200549
[Effect of intracerebral injections of <span class="gene" id="7913897-0-39-51">somatostatin</span> and neurotensin on motor functions in <span class="disease" id="7913897-0-90-97">seizure</span>].
CTD_human
null
null
Negative
MESH:D064420
null
null
cytotoxicity
17766
null
MTH1
null
28,067,232
Increased cytotoxicity following MTH1 knockout or treatment with MTH1 inhibitor suggests the oxidation of precursor nucleotides.
null
null
null
null
null
Negative
MESH:D007674
null
null
renal fibrosis
13590
null
Lefty
null
28,213,468
Lefty A, a potent inhibitor of transforming growth factor (TGF)-b signaling, has been shown to have promising antifibrotic ability in vitro for the treatment of renal fibrosis and other potential organ fibroses.
null
null
null
1
0
Biomarker
C1510586
Autism Spectrum Disorders
disease
ASD
25942
SIN3A
SIN3A
CTD_human
27,399,968
Here we identified dominant mutations in the gene encoding the transcriptional repressor and MeCP2 interactor switch-insensitive 3 family member A (SIN3A; chromosome 15q24.2) in individuals who, in addition to mild intellectual disability and ASD, share striking features, including facial dysmorphisms, microcephaly and short stature.
0.2
Here we identified dominant mutations in the gene encoding the transcriptional repressor and MeCP2 interactor switch-insensitive 3 family member A (<span class="gene" id="27399968-2-148-153">SIN3A</span>; chromosome 15q24.2) in individuals who, in addition to mild intellectual disability and <span class="disease" id="27399968-2-243-246">ASD</span>, share striking features, including facial dysmorphisms, microcephaly and short stature.
CTD_human
null
null
Negative
MESH:C562591
null
null
XPD
2073
null
ERCC5
null
28,115,302
Thirty-eight polymorphisms in eight NER genes were genotyped by Sequenom MassARRAY platform, including XPA, XPC, DDB2, XPB (ERCC3), XPD (ERCC2), ERCC1, XPF (ERCC4), and XPG (ERCC5).
null
null
null
1
0
Biomarker
C0031117
Peripheral Neuropathy
group
Peripheral neuropathy
2707
GJB3
GJB3
CTD_human
11,309,368
Peripheral neuropathy is the third phenotypic alteration linked to GJB3 mutations, which enlarges the list of genes that cause this group of heterogeneous disorders.
0.201099
<span class="disease" id="11309368-7-0-21">Peripheral neuropathy</span> is the third phenotypic alteration linked to <span class="gene" id="11309368-7-67-71">GJB3</span> mutations, which enlarges the list of genes that cause this group of heterogeneous disorders.
CTD_human
1
0
Therapeutic
C0001883
Airway Obstruction
group
airway obstruction
7035
TFPI
Tissue factor pathway inhibitor
CTD_human
23,727,623
Tissue factor pathway inhibitor prevents airway obstruction, respiratory failure and death due to sulfur mustard analog inhalation.
0.2
<span class="gene" id="23727623-0-0-31">Tissue factor pathway inhibitor</span> prevents <span class="disease" id="23727623-0-41-59">airway obstruction</span>, respiratory failure and death due to sulfur mustard analog inhalation.
CTD_human
96
174
Biomarker
C0019202
Hepatolenticular Degeneration
disease
WND
540
ATP7B
ATP7B
CTD_human
14,579,150
The genes for two copper-transporting ATPases, ATP7A and ATP7B, are defective in the heritable disorders of copper imbalance, Menkes disease (MNK) and Wilson disease (WND), respectively.
0.885769
The genes for two copper-transporting ATPases, ATP7A and <span class="gene" id="14579150-1-57-62">ATP7B</span>, are defective in the heritable disorders of copper imbalance, Menkes disease (MNK) and <span class="disease" id="14579150-1-151-165">Wilson disease</span> (<span class="disease" id="14579150-1-167-170">WND</span>), respectively.
CTD_human;ORPHANET;UNIPROT
6
1,072
Biomarker
C0020445
Hypercholesterolemia, Familial
disease
familial hypercholesterolemia
3949
LDLR
LDL-receptor
CTD_human
12,009,418
A "de novo" mutation of the LDL-receptor gene as the cause of familial hypercholesterolemia.
0.622857
A "de novo" mutation of the <span class="gene" id="12009418-0-28-40">LDL-receptor</span> gene as the cause of <span class="disease" id="12009418-0-62-91">familial hypercholesterolemia</span>.
CTD_human;HPO
null
null
Negative
MESH:D009369
null
null
mammary tumor
21803
null
TGF-b1
null
28,078,601
Canine metastatic mammary tumor cell line CF41 was stably transduced with a shRNA-lentivirus, reducing expression level of TGF-b1.
null
null
null
2
0
Biomarker
C0751072
Frontotemporal Lobar Degeneration
disease
FTLD
23435
TARDBP
TDP-43
CTD_human
24,252,504
TAR DNA-binding protein 43 (TDP-43) is a protein that is involved in the pathology of Amyotrophic Lateral Sclerosis (ALS) and Frontotemporal Lobar Degeneration (FTLD).
0.259275
<span class="gene" id="24252504-1-0-26">TAR DNA-binding protein 43</span> (<span class="gene" id="24252504-1-28-34">TDP-43</span>) is a protein that is involved in the pathology of Amyotrophic Lateral Sclerosis (ALS) and <span class="disease" id="24252504-1-126-159">Frontotemporal Lobar Degeneration</span> (<span class="disease" id="24252504-1-161-165">FTLD</span>).
CTD_human
11
0
Biomarker
C0003469
Anxiety Disorders
group
anxiety
1392
CRH
CRF
CTD_human
12,438,692
CRF elicited a wide range of behaviors, which fell into three broad categories: anxiety-like, depressive-like, and externally oriented.
0.206868
<span class="gene" id="12438692-5-0-3">CRF</span> elicited a wide range of behaviors, which fell into three broad categories: <span class="disease" id="12438692-5-80-87">anxiety</span>-like, depressive-like, and externally oriented.
CTD_human
4
0
Therapeutic
C0023530
Leukopenia
disease
leukopenia
1440
CSF3
G-CSF
CTD_human
16,120,623
Accidentally, we observed a complete response (CR) in a patient undergoing chemotherapy with bleomycin, vincristine or Oncovin, CCNU or lomustine, dacarbazine (BOLD) regimen for metastatic melanoma including brain metastases, who was also treated with G-CSF to manage a concomitant leukopenia.
0.212912
Accidentally, we observed a complete response (CR) in a patient undergoing chemotherapy with bleomycin, vincristine or Oncovin, CCNU or lomustine, dacarbazine (BOLD) regimen for metastatic melanoma including brain metastases, who was also treated with <span class="gene" id="16120623-2-252-257">G-CSF</span> to manage a concomitant <span class="disease" id="16120623-2-282-292">leukopenia</span>.
CTD_human
5
0
Biomarker
C0004096
Asthma
disease
asthma
7124
TNF
TNF
CTD_human
16,456,144
The TNF-308 GG genotype may have a protective role in asthma pathogenesis, depending on airway oxidative stress levels.
0.350679
The <span class="gene" id="16456144-11-4-7">TNF</span>-308 GG genotype may have a protective role in <span class="disease" id="16456144-11-54-60">asthma</span> pathogenesis, depending on airway oxidative stress levels.
CTD_human
1
0
Biomarker
C2239176
Liver carcinoma
disease
hepatocellular carcinomas
406906
MIR122
miR-122
CTD_human
16,924,677
Downregulation of miR-122 in the rodent and human hepatocellular carcinomas.
0.231825
Downregulation of <span class="gene" id="16924677-0-18-25">miR-122</span> in the rodent and human <span class="disease" id="16924677-0-50-75">hepatocellular carcinomas</span>.
CTD_human
null
null
Negative
MESH:D006984
null
null
hypertrophy
25125
null
Signal transducer and activator of transcription 3
null
28,031,326
Signal transducer and activator of transcription 3 (STAT-3)-mediated signaling in relation to upregulated collagen expression in fibroblasts during cardiac hypertrophy is well defined.
null
null
null