visualization / app.py
rockerritesh's picture
Update app.py
d2b6669 verified
raw
history blame
6.75 kB
import gradio as gr
import networkx as nx
import matplotlib.pyplot as plt
from neo4j import GraphDatabase
import io
import base64
class Neo4jGraphVisualizer:
def __init__(self, uri, username, password):
"""
Initialize the Neo4j graph database connection
Args:
uri (str): Neo4j database URI
username (str): Neo4j username
password (str): Neo4j password
"""
self.driver = GraphDatabase.driver(uri, auth=(username, password))
def fetch_graph_data(self):
"""
Fetch graph data from Neo4j database
Returns:
dict: A dictionary containing nodes and relationships
"""
with self.driver.session() as session:
# Fetch all nodes with elementId instead of deprecated ID()
nodes_result = session.run("""
MATCH (n)
RETURN elementId(n) as id,
labels(n) as labels,
properties(n) as properties
""")
# Fetch all relationships using elementId
relationships_result = session.run("""
MATCH (a)-[r]->(b)
RETURN
elementId(a) as source_id,
elementId(b) as target_id,
type(r) as relationship_type,
properties(r) as relationship_properties
""")
# Process nodes
nodes = [
{
'id': record['id'],
'label': record['labels'][0] if record['labels'] else 'Unknown',
'properties': dict(record['properties'])
}
for record in nodes_result
]
# Process relationships
relationships = [
{
'source': record['source_id'],
'target': record['target_id'],
'type': record['relationship_type'],
'properties': dict(record.get('relationship_properties', {}))
}
for record in relationships_result
]
return {'nodes': nodes, 'relationships': relationships}
def visualize_graph(self):
"""
Visualize the graph using NetworkX and Matplotlib
Returns:
str: Base64 encoded image of the graph
"""
try:
# Fetch graph data
graph_data = self.fetch_graph_data()
# Create NetworkX graph
G = nx.DiGraph()
# Add nodes
for node in graph_data['nodes']:
# Use node's label or properties for display
label = node.get('properties', {}).get('name', str(node['id']))
G.add_node(node['id'],
label=label,
properties=node['properties'])
# Add edges
for rel in graph_data['relationships']:
G.add_edge(rel['source'], rel['target'],
type=rel['type'],
properties=rel['properties'])
# Visualization
plt.figure(figsize=(16, 12))
pos = nx.spring_layout(G, k=0.9, iterations=50) # Improved layout
# Draw nodes with color and size based on properties
node_sizes = [300 + len(str(G.nodes[node]['properties'])) * 10 for node in G.nodes()]
node_colors = ['lightblue' if idx % 2 == 0 else 'lightgreen' for idx in range(len(G.nodes()))]
nx.draw_networkx_nodes(G, pos,
node_color=node_colors,
node_size=node_sizes,
alpha=0.8)
# Draw edges
nx.draw_networkx_edges(G, pos,
edge_color='gray',
arrows=True,
width=1.5)
# Draw labels
nx.draw_networkx_labels(G, pos,
labels={node: G.nodes[node]['label'] for node in G.nodes()},
font_size=8)
plt.title("Neo4j Graph Visualization")
plt.axis('off')
# Save to buffer
buffer = io.BytesIO()
plt.savefig(buffer, format='png', dpi=300, bbox_inches='tight')
buffer.seek(0)
image_png = buffer.getvalue()
buffer.close()
plt.close() # Close the plot to free memory
# Encode
graphic = base64.b64encode(image_png).decode('utf-8')
return f"data:image/png;base64,{graphic}"
except Exception as e:
print(f"Error in graph visualization: {e}")
return f"Error visualizing graph: {e}"
def close(self):
"""Close the Neo4j driver connection"""
self.driver.close()
def create_gradio_interface(uri, username, password):
"""
Create a Gradio interface for Neo4j graph visualization
Args:
uri (str): Neo4j database URI
username (str): Neo4j username
password (str): Neo4j password
"""
visualizer = Neo4jGraphVisualizer(uri, username, password)
def visualize_graph():
try:
graph_image = visualizer.visualize_graph()
return graph_image
except Exception as e:
return f"Error: {str(e)}"
# Create Gradio interface
iface = gr.Interface(
fn=visualize_graph,
inputs=[],
outputs=gr.Image(type="filepath"),
title="Neo4j Graph Visualization",
description="Visualize graph data from Neo4j database"
)
return iface, visualizer
# Configuration (replace with your actual Neo4j credentials)
NEO4J_URI="neo4j+s://b96332bd.databases.neo4j.io"
NEO4J_USERNAME="neo4j"
NEO4J_PASSWORD="qviTdN6cw66AjIv6lu7kXcsN4keYPdXc2gAWuIoB8T4"
AURA_INSTANCEID="b96332bd"
AURA_INSTANCENAME="Instance01"
def main():
# Create Gradio interface
interface, visualizer = create_gradio_interface(
NEO4J_URI,
NEO4J_USERNAME,
NEO4J_PASSWORD
)
try:
# Launch the interface
interface.launch(server_name='0.0.0.0', server_port=7860)
except Exception as e:
print(f"Error launching interface: {e}")
finally:
# Ensure driver is closed
visualizer.close()
if __name__ == "__main__":
main()