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d7d32d4
1
Parent(s):
4db8a9a
Update code/pdb_featureVector.py
Browse files
code/pdb_featureVector.py
CHANGED
@@ -1394,7 +1394,15 @@ def pdb(input_set, mode, impute):
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chain = data.at[i, 'chain']
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uniprotID = data.at[i, 'uniprotID']
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pdbID = data.at[i, 'pdbID']
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-
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alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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mutPos = data.at[i, 'mutationPositionOnPDB']
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chain = data.at[i, 'chain']
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uniprotID = data.at[i, 'uniprotID']
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pdbID = data.at[i, 'pdbID']
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st.write(identifier)
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st.write(model_num)
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st.write(pdb_path)
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st.write(pdbSequence)
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st.write(source)
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st.write(chain),
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st.write(pdbID)
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st.write(mode)
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st.write(path_3D_alignment)
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alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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mutPos = data.at[i, 'mutationPositionOnPDB']
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