fatmacankara commited on
Commit
d7d32d4
·
1 Parent(s): 4db8a9a

Update code/pdb_featureVector.py

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  1. code/pdb_featureVector.py +9 -1
code/pdb_featureVector.py CHANGED
@@ -1394,7 +1394,15 @@ def pdb(input_set, mode, impute):
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  chain = data.at[i, 'chain']
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  uniprotID = data.at[i, 'uniprotID']
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  pdbID = data.at[i, 'pdbID']
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-
 
 
 
 
 
 
 
 
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']
 
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  chain = data.at[i, 'chain']
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  uniprotID = data.at[i, 'uniprotID']
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  pdbID = data.at[i, 'pdbID']
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+ st.write(identifier)
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+ st.write(model_num)
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+ st.write(pdb_path)
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+ st.write(pdbSequence)
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+ st.write(source)
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+ st.write(chain),
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+ st.write(pdbID)
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+ st.write(mode)
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+ st.write(path_3D_alignment)
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  alignments = get_alignments_3D(uniprotID, 'nan', pdb_path, pdbSequence, source, chain, pdbID, mode, Path(path_to_output_files / '3D_alignment'), file_format = 'gzip')
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  mutPos = data.at[i, 'mutationPositionOnPDB']