fatmacankara commited on
Commit
bb579bd
·
1 Parent(s): f8c54bb

Update code/add_3Dalignment.py

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Files changed (1) hide show
  1. code/add_3Dalignment.py +4 -4
code/add_3Dalignment.py CHANGED
@@ -265,10 +265,10 @@ def get_alignments_3D(identifier, model_num, pdb_path, pdbSequence, source, chai
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  aligner.substitution_matrix = substitution_matrices.load("BLOSUM62")
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  aligner.open_gap_score = -11
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  aligner.extend_gap_score = -1
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- print('I wanna sleep')
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- print(pdbSequence)
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- print(atomSequence)
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- print(aligner.align(pdbSequence, atomSequence))
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  alignments = aligner.align(pdbSequence, atomSequence)
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  alignments = (list(alignments))
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  print('IN FUNC')
 
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  aligner.substitution_matrix = substitution_matrices.load("BLOSUM62")
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  aligner.open_gap_score = -11
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  aligner.extend_gap_score = -1
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+ st.write('I wanna sleep')
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+ st.write(pdbSequence)
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+ st.write(atomSequence)
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+ st.write(aligner.align(pdbSequence, atomSequence))
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  alignments = aligner.align(pdbSequence, atomSequence)
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  alignments = (list(alignments))
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  print('IN FUNC')