fatmacankara commited on
Commit
35bdb15
·
1 Parent(s): 4256fa9

Update code/pdb_featureVector.py

Browse files
Files changed (1) hide show
  1. code/pdb_featureVector.py +2 -2
code/pdb_featureVector.py CHANGED
@@ -281,7 +281,7 @@ def pdb(input_set, mode, impute):
281
  pdb_info.at[index, 'resolution'] = 'nan'
282
  index += 1
283
  cnt += 1
284
-
285
  print('PDB file processing finished..')
286
  for filename in list(Path(path_to_output_files / 'pdb_structures').glob("*")):
287
  try:
@@ -313,7 +313,7 @@ def pdb(input_set, mode, impute):
313
  uniprot_matched.resolution == 'None'))]
314
  no_pdb = no_pdb[~no_pdb.datapoint.isin(with_pdb.datapoint.to_list())]
315
  no_pdb.drop(columns=['chain', 'pdbID', 'pdbSequence', 'resolution'], inplace=True)
316
-
317
  print(
318
  'PDB Information successfully added...\nPDB structures are found for %d of %d.\n%d of %d failed to match with PDB structure.\n'
319
  % (len(with_pdb.drop_duplicates(['datapoint'])), len(uniprot_matched.drop_duplicates(['datapoint'])),
 
281
  pdb_info.at[index, 'resolution'] = 'nan'
282
  index += 1
283
  cnt += 1
284
+ st.write(pdb_info)
285
  print('PDB file processing finished..')
286
  for filename in list(Path(path_to_output_files / 'pdb_structures').glob("*")):
287
  try:
 
313
  uniprot_matched.resolution == 'None'))]
314
  no_pdb = no_pdb[~no_pdb.datapoint.isin(with_pdb.datapoint.to_list())]
315
  no_pdb.drop(columns=['chain', 'pdbID', 'pdbSequence', 'resolution'], inplace=True)
316
+ st.write(with_pdb)
317
  print(
318
  'PDB Information successfully added...\nPDB structures are found for %d of %d.\n%d of %d failed to match with PDB structure.\n'
319
  % (len(with_pdb.drop_duplicates(['datapoint'])), len(uniprot_matched.drop_duplicates(['datapoint'])),