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Runtime error
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base_dir=data/interpro_motif/IPR000048
python src/crawler/sequence/download_uniprot_seq.py \
-f $base_dir/failed.txt \
-o $base_dir/unfold_fasta
base_dir=data/interpro_domain
python src/crawler/sequence/download_uniprot_seq.py \
-f $base_dir/unfolded_proteins.txt \
-o $base_dir/unfold_fasta
base_dir=data/interpro_motif
for dir in "$base_dir"/IPR*; do
if [ -d "$dir" ]; then
inter_id=$(basename "$dir")
python src/crawler/sequence/download_uniprot_seq.py -f $base_dir/$inter_id/failed.txt -o data/motif_unfold
fi
done
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