Fix dependency

setup/install_maskal.sh

@@ -4,17 +4,16 @@ sudo apt install python3-pyqt5 -y
 sudo pip3 install labelme
 # install required
 pip3 install --user torch==1.10.1+cu111 torchvision==0.11.2+cu111 torchaudio===0.10.1 -f https://download.pytorch.org/whl/torch_stable.html
-pip3 install cython pyyaml==5.1
+pip3 install cython pyyaml==5.3
 pip3 install -U 'git+https://github.com/cocodataset/cocoapi.git#subdirectory=PythonAPI'
 pip3 install jupyter
 pip3 install opencv-python
 pip3 install -U fvcore
-pip3 install nbclient==0.5.3 nbconvert==6.0.7 nbformat==5.1.3
-pip3 install importlib-metadata==4.2 markdown==3.2
+pip3 install nbclient==0.5.3 nbconvert==6.4.4 nbformat==5.3.0
+pip3 install importlib-metadata==4.8.3 markdown==3.2
 pip3 install scikit-image matplotlib imageio
 pip3 install black isort flake8 flake8-bugbear flake8-comprehensions
-pip3 install pickle5==0.0.12
-pip3 install -e .
+pip3 install pickle5==0.0.11
 pip3 install scikit-learn==0.22.2
 pip3 install pandas
 pip3 install h5py
@@ -31,16 +30,20 @@ pip3 install darwin-py
 pip3 install pyyaml numpy torch
 pip3 install opencv-python pip install opencv-contrib-python
 pip3 install tqdm cerberus fvcore torchvision
+pip3 install pycocotools==2.0.2
 pip3 install detectron2==0.1.3 -f https://dl.fbaipublicfiles.com/detectron2/wheels/cu101/torch1.5/index.html
 pip3 install colorama
 # fix baal bug
 sed -i \
 "s@from structlog.dev import ConsoleRenderer, _has_colorama@from structlog.dev import ConsoleRenderer\ntry:\n    import colorama\n    _has_colorama = True\nexcept ImportError:\n    _has_colorama = False@g" \
-~/.local/lib/python3.6/site-packages/baal/utils/log_configuration.py
+~/.local/lib/python3.8/site-packages/baal/utils/log_configuration.py
+
 # install maskal
-mkdir -p ~/lib && cd ~/lib
-git clone [email protected]:pieterblok/maskal.git
-cd maskal
+# mkdir -p ~/lib && cd ~/lib
+# git clone [email protected]:pieterblok/maskal.git
+# cd maskal
+# pip3 install -e .
+
 # install anaconda
 # sudo apt install -y curl;
 # mkdir -p ~/lib/anaconda_installation;
@@ -49,3 +52,9 @@ cd maskal
 # chmod +x Anaconda3-5.2.0-Linux-x86_64.sh;
 # ./Anaconda3-5.2.0-Linux-x86_64.sh;
 # conda create --name maskAL python=3.6 pip
+
+# Prepare Workspace
+SCRIPT_DIR=$(cd $(dirname $0); pwd)
+mkdir -p $SCRIPT_DIR/../maskal_ws/datasets
+mkdir -p $SCRIPT_DIR/../maskal_ws/results
+mkdir -p $SCRIPT_DIR/../maskal_ws/weights