setup/install_maskal.sh

#!/bin/bash
### Install apt packages
sudo apt install python3-pyqt5 -y
### Install git-lfs 
curl -s https://packagecloud.io/install/repositories/github/git-lfs/script.deb.sh | sudo bash
sudo apt install git-lfs
git lfs install
### Install required
pip3 install --user torch==1.10.1+cu111 torchvision==0.11.2+cu111 torchaudio===0.10.1 -f https://download.pytorch.org/whl/torch_stable.html
pip3 install cython pyyaml==6.0.1
pip3 install jupyter
pip3 install opencv-python
pip3 install -U fvcore==0.1.4
pip3 install nbclient==0.5.3 nbconvert==6.4.4 nbformat==5.3.0
pip3 install importlib-metadata==4.8.3 markdown==3.2
pip3 install scikit-image matplotlib imageio
pip3 install black isort flake8 flake8-bugbear flake8-comprehensions
pip3 install pickle5==0.0.11
pip3 install scikit-learn==0.22.2
pip3 install pandas
pip3 install h5py
pip3 install structlog
pip3 install baal==1.3.2 pytorch-lightning==1.5.10
pip3 install transformers
pip3 install onnx==1.8.1
pip3 install xmltodict
pip3 install seaborn
pip3 install statsmodels
pip3 install cerberus
pip3 install darwin-py
pip3 install multiprocess==0.70.12.2 pathos==0.2.8 dill==0.3.6 datasets==2.13.0 numpy==1.21.6
pip3 install pyyaml torch
pip3 install opencv-python pip install opencv-contrib-python
pip3 install tqdm cerberus fvcore torchvision
pip3 install pycocotools==2.0.2
pip3 install colorama
pip3 install omegaconf==2.2
### Install detectron2
# pip3 install detectron2 -f https://dl.fbaipublicfiles.com/detectron2/wheels/cu101/torch1.5/index.html
pip3 install git+ssh://[email protected]/facebookresearch/[email protected]

### Fix baal bug
sed -i \
"s@from structlog.dev import ConsoleRenderer, _has_colorama@from structlog.dev import ConsoleRenderer\ntry:\n    import colorama\n    _has_colorama = True\nexcept ImportError:\n    _has_colorama = False@g" \
~/.local/lib/python3.8/site-packages/baal/utils/log_configuration.py

### Install cocoapi
pip3 install -U 'git+ssh://[email protected]/cocodataset/cocoapi.git#subdirectory=PythonAPI'

### Install labelme
pip3 install git+ssh://[email protected]/nyxrobotics/labelme.git@feature/wacom

### Install maskal
pip3 install git+ssh://[email protected]/nyxrobotics/maskal.git@feature/fix_bug

### Install anaconda
# sudo apt install -y curl;
# mkdir -p ~/lib/anaconda_installation;
# cd ~/lib/anaconda_installation;
# curl -O https://repo.anaconda.com/archive/Anaconda3-5.2.0-Linux-x86_64.sh;
# chmod +x Anaconda3-5.2.0-Linux-x86_64.sh;
# ./Anaconda3-5.2.0-Linux-x86_64.sh;
# conda create --name maskAL python=3.6 pip

### Prepare Workspace
SCRIPT_DIR=$(cd $(dirname $0); pwd)
mkdir -p $SCRIPT_DIR/../maskal_ws/datasets
mkdir -p $SCRIPT_DIR/../maskal_ws/results
mkdir -p $SCRIPT_DIR/../maskal_ws/weights